Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_G18
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   226   2e-59
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   226   2e-59
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   226   2e-59
BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p pro...    31   1.6  

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  226 bits (552), Expect = 2e-59
 Identities = 106/149 (71%), Positives = 117/149 (78%)
 Frame = +3

Query: 123 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESR 302
           YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV              NFGIWLRY+SR
Sbjct: 28  YKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSR 87

Query: 303 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHN 482
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH+
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHD 147

Query: 483 STIRFPLPKRVHHYKRLNTFAYKRXSTYF 569
           S I+FPL +RVHH      F++++  TYF
Sbjct: 148 SKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 41 MKAKGQLREYEVIGRK 88
          M+AKG L+EYEV+GRK
Sbjct: 1  MRAKGLLKEYEVVGRK 16


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  226 bits (552), Expect = 2e-59
 Identities = 106/149 (71%), Positives = 117/149 (78%)
 Frame = +3

Query: 123 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESR 302
           YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV              NFGIWLRY+SR
Sbjct: 28  YKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSR 87

Query: 303 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHN 482
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH+
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHD 147

Query: 483 STIRFPLPKRVHHYKRLNTFAYKRXSTYF 569
           S I+FPL +RVHH      F++++  TYF
Sbjct: 148 SKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 41 MKAKGQLREYEVIGRK 88
          M+AKG L+EYEV+GRK
Sbjct: 1  MRAKGLLKEYEVVGRK 16


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  226 bits (552), Expect = 2e-59
 Identities = 106/149 (71%), Positives = 117/149 (78%)
 Frame = +3

Query: 123 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESR 302
           YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV              NFGIWLRY+SR
Sbjct: 28  YKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSR 87

Query: 303 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHN 482
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH+
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHD 147

Query: 483 STIRFPLPKRVHHYKRLNTFAYKRXSTYF 569
           S I+FPL +RVHH      F++++  TYF
Sbjct: 148 SKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 41 MKAKGQLREYEVIGRK 88
          M+AKG L+EYEV+GRK
Sbjct: 1  MRAKGLLKEYEVVGRK 16


>BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p
          protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 41 MKAKGQLREYEVIGRK 88
          M+AKG L+EYEV+GRK
Sbjct: 1  MRAKGLLKEYEVVGRK 16


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,259,354
Number of Sequences: 53049
Number of extensions: 519466
Number of successful extensions: 1674
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)