Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_G17
(460 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 59 6e-09
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 59 6e-09
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 59 6e-09
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 59 6e-09
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 59 6e-09
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 59 6e-09
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 59 6e-09
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 59 6e-09
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 55 1e-07
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 55 1e-07
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 55 1e-07
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 55 1e-07
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 55 1e-07
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 55 1e-07
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 55 1e-07
AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA seq... 39 0.009
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 34 0.27
AK056459-1|BAB71191.1| 331|Homo sapiens protein ( Homo sapiens ... 31 1.4
AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens ... 31 1.9
X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase prot... 31 2.5
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 31 2.5
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 31 2.5
AL357117-2|CAI14133.1| 634|Homo sapiens phosphatase and actin r... 29 5.8
AL078593-4|CAI19814.1| 634|Homo sapiens phosphatase and actin r... 29 5.8
AL049844-4|CAI21446.1| 634|Homo sapiens phosphatase and actin r... 29 5.8
AB014580-1|BAA31655.2| 635|Homo sapiens KIAA0680 protein protein. 29 5.8
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 59.3 bits (137), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 200 CQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
CQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 40 CQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 43.6 bits (98), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+C+Q+Y+DFHR ++ K
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAK 47
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 212 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 212 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 212 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 212 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 212 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 212 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 212 RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 331
RG+ +PC Y+ RVY SLCP WV+ W+ Q G FAG+I
Sbjct: 49 RGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FP+QNQ R+CYQ+++D+HR ++ R+
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRR 49
>AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA
sequence from clone RP4-591N18 on chromosome
22q13.1-13.2.33 Contains the C22orf34 gene for
chromosome 22 open reading frame 34. ).
Length = 108
Score = 38.7 bits (86), Expect = 0.009
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 233 CYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGR 328
C +++ VY+SLCP W WD+ + F GR
Sbjct: 55 CEWYQHVYKSLCPIPWASAWDDHGQKAHFLGR 86
Score = 34.3 bits (75), Expect = 0.20
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 142 FPNQNQTRHCYQSYVDFHRLPESSRRK 222
FPNQNQTR+ +Q Y+D H ++ K
Sbjct: 21 FPNQNQTRNGWQKYLDLHHFKKAMTAK 47
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 33.9 bits (74), Expect = 0.27
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 216 AKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 320
+ +T H+T+S T +++P + + +G TS P +PS
Sbjct: 21 SSSTIHSTVSSSTTAITSPFTTAETGVTSTPSSPS 55
>AK056459-1|BAB71191.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ31897 fis, clone NT2RP7004080, weakly similar to
CELL SURFACE GLYCOPROTEIN 1 PRECURSOR. ).
Length = 331
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 162 EALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSG 281
E + PK +PP R FA KNTS+ SR AP++G
Sbjct: 284 EEVAPK-EEVPPIERAFAQKNTSYQAASRLPRDARAPLAG 322
>AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ45786 fis, clone NETRP2008488. ).
Length = 129
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 356 KHRERLG-SKSYRRRCLRRAGCPTCRPTHWGRET 258
K R++ G K RR+ LR+A CP+ RP G +T
Sbjct: 58 KGRQKAGLEKGNRRKELRQANCPSLRPQRKGADT 91
>X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase
protein.
Length = 17
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 281 VDKWDNQRAEGTFAGRI 331
V WD QRAEGTF G+I
Sbjct: 1 VTDWDEQRAEGTFPGKI 17
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 225 TSHATISRECTGLSAPMSGSTSGTTSAPKAPS 320
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 225 TSHATISRECTGLSAPMSGSTSGTTSAPKAPS 320
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>AL357117-2|CAI14133.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 192 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 314
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 209 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 249
>AL078593-4|CAI19814.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 192 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 314
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 209 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 249
>AL049844-4|CAI21446.1| 634|Homo sapiens phosphatase and actin
regulator 2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 192 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 314
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 209 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 249
>AB014580-1|BAA31655.2| 635|Homo sapiens KIAA0680 protein protein.
Length = 635
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 192 PPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 314
P A + + + ++ S++ TG A S STS T+S PKA
Sbjct: 210 PKPASRNTTREAAGSSHSKKTTGSKASASPSTSSTSSRPKA 250
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,594,552
Number of Sequences: 237096
Number of extensions: 1292719
Number of successful extensions: 8150
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8146
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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