Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_G16
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical p... 34 0.076
AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical ... 34 0.076
Z79602-2|CAB01889.1| 380|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 30 1.6
Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical p... 29 2.9
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 29 2.9
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 29 2.9
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 29 2.9
AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical ... 29 2.9
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 29 2.9
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 29 3.8
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 29 3.8
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 29 3.8
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 29 3.8
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC084152-6|AAK39316.1| 286|Caenorhabditis elegans Hypothetical ... 28 6.6
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 27 8.7
>Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +3
Query: 240 TYYLDSNLVFKFMPDIDMDEKLRINIDITVAMPCSNIGSDILDSTSQSVFGFG----ELQ 407
T+ ++F D +MDE +++D+ + PCS + ++ S+ + G G +Q
Sbjct: 60 TFLFHKKYDYRFALDTEMDEMPLLDLDMVINTPCSIL--QVVSSSDEYSGGDGLLRQTIQ 117
Query: 408 EEDTWFELTEEQQ 446
+ T F+ T+E+Q
Sbjct: 118 KNPTRFDFTDEEQ 130
>AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +3
Query: 240 TYYLDSNLVFKFMPDIDMDEKLRINIDITVAMPCSNIGSDILDSTSQSVFGFG----ELQ 407
T+ ++F D +MDE +++D+ + PCS + ++ S+ + G G +Q
Sbjct: 60 TFLFHKKYDYRFALDTEMDEMPLLDLDMVINTPCSIL--QVVSSSDEYSGGDGLLRQTIQ 117
Query: 408 EEDTWFELTEEQQ 446
+ T F+ T+E+Q
Sbjct: 118 KNPTRFDFTDEEQ 130
>Z79602-2|CAB01889.1| 380|Caenorhabditis elegans Hypothetical
protein K09E9.2 protein.
Length = 380
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 588 DACRLHGVLTLNKVAGNFHI 647
+ CR++G + + KVAGNFH+
Sbjct: 196 EGCRVYGTVKVAKVAGNFHL 215
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 228 YSEVTYYLDSNLVFKFMPDIDMDEKLRINIDIT---VAMPCSNIGSDILDSTSQSVFGFG 398
+ ++Y L +KF ++ EKL +NID + V +P +N+ +DIL V +
Sbjct: 111 FDVISYQLFDYWFYKFYNQLNNSEKLDLNIDDSFEYVPIPFANLPNDILCEILDKVNAYQ 170
Query: 399 EL 404
+L
Sbjct: 171 KL 172
>Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 348 IGSDILDSTSQSVFGFGELQEEDTWFELTEEQQDAFDA-IKYINSYLREEYHSVWQLLWK 524
+G+ ST+Q+ G T E T Q A K + +YL+++Y+S+ +W
Sbjct: 308 VGTTTTSSTTQATTIGGSTSTAGTTVEATTTTQATSCARFKNLQNYLKKKYYSILVCIWS 367
Query: 525 KGHGSVRST 551
+R T
Sbjct: 368 STFLYLRKT 376
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 358 ISWTLPRKVFSDSVNYKRKTLGSSSQKNNKM 450
I+W +K FSD ++ KTLG + NN++
Sbjct: 96 IAWFSDKKTFSDRKSHIHKTLGRIQKMNNQI 126
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 358 ISWTLPRKVFSDSVNYKRKTLGSSSQKNNKM 450
I+W +K FSD ++ KTLG + NN++
Sbjct: 126 IAWFSDKKTFSDRKSHIHKTLGRIQKMNNQI 156
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 358 ISWTLPRKVFSDSVNYKRKTLGSSSQKNNKM 450
I+W +K FSD ++ KTLG + NN++
Sbjct: 128 IAWFSDKKTFSDRKSHIHKTLGRIQKMNNQI 158
>AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 348 IGSDILDSTSQSVFGFGELQEEDTWFELTEEQQDAFDA-IKYINSYLREEYHSVWQLLWK 524
+G+ ST+Q+ G T E T Q A K + +YL+++Y+S+ +W
Sbjct: 308 VGTTTTSSTTQATTIGGSTSTAGTTVEATTTTQATSCARFKNLQNYLKKKYYSILVCIWS 367
Query: 525 KGHGSVRST 551
+R T
Sbjct: 368 STFLYLRKT 376
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 358 ISWTLPRKVFSDSVNYKRKTLGSSSQKNNKM 450
I+W +K FSD ++ KTLG + NN++
Sbjct: 96 IAWFSDKKTFSDRKSHIHKTLGRIQKMNNQI 126
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 408 EEDTWFELTEEQQDAFDAIKYINSYL-REEYHSVWQLLWK 524
E ++ L+ + A DAI+YI +L R+E H ++ WK
Sbjct: 398 ETSAYYPLSTDALRAIDAIEYITEHLKRDEQHKSFRDDWK 437
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 408 EEDTWFELTEEQQDAFDAIKYINSYL-REEYHSVWQLLWK 524
E ++ L+ + A DAI+YI +L R+E H ++ WK
Sbjct: 398 ETSAYYPLSTDALRAIDAIEYITEHLKRDEQHKSFRDDWK 437
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 408 EEDTWFELTEEQQDAFDAIKYINSYL-REEYHSVWQLLWK 524
E ++ L+ + A DAI+YI +L R+E H ++ WK
Sbjct: 398 ETSAYYPLSTDALRAIDAIEYITEHLKRDEQHKSFRDDWK 437
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 375 SQSVFGFGELQEEDTWFELTEEQQDAFD 458
S +F FG+ +EED LT+EQ D F+
Sbjct: 272 SYLIFEFGKDEEEDLELSLTDEQLDYFN 299
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 531 DPFSKAAAKRNDTLLLNKSL 472
D FSK A KR+DT++L K+L
Sbjct: 471 DAFSKPAEKRSDTVMLAKNL 490
>AC084152-6|AAK39316.1| 286|Caenorhabditis elegans Hypothetical
protein Y102A11A.6 protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 558 ERKTKMNTRPDACRLHGVLTLNKVAGNFHIT 650
++ K++ CR +NKV GNFH++
Sbjct: 99 DQTNKVSIGDGGCRFESRFEINKVPGNFHLS 129
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 157 FIRNFRESIVFLYFFQNVLFPSIP*HVFLV 68
F R +E+ F +NV F IP H+FLV
Sbjct: 405 FTRRIKETEGFELIIENVSFARIPEHLFLV 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,347,531
Number of Sequences: 27780
Number of extensions: 288559
Number of successful extensions: 714
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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