Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_G11
(438 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 105 1e-23
09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841 105 1e-23
08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848... 105 1e-23
09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078... 73 1e-13
12_01_0973 - 9803378-9803724,9804057-9804163,9804208-9804443,980... 30 0.93
07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824... 30 0.93
02_04_0109 + 19812544-19814474,19814574-19814607 29 2.2
07_03_0808 - 21668100-21669092 28 2.9
08_02_1245 - 25557201-25558199 28 3.8
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 27 5.0
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094... 27 5.0
04_04_1065 + 30529555-30530076 27 6.6
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873... 27 6.6
10_08_0643 + 19541991-19542188,19543261-19543515,19543598-195437... 27 8.7
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 27 8.7
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 105 bits (253), Expect = 1e-23
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +1
Query: 217 RGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRK 396
+G LMPNIGYGS+KKTRH LPN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK
Sbjct: 48 KGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRK 107
Query: 397 LIVEKS 414
IVE++
Sbjct: 108 EIVERA 113
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +3
Query: 72 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGSIL 230
MA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG L
Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTL 52
>09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841
Length = 133
Score = 105 bits (253), Expect = 1e-23
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +1
Query: 217 RGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRK 396
+G LMPNIGYGS+KKTRH LPN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK
Sbjct: 48 KGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRK 107
Query: 397 LIVEKS 414
IVE++
Sbjct: 108 EIVERA 113
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +3
Query: 72 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGSIL 230
MA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG L
Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTL 52
>08_02_1315 +
26083856-26083945,26084093-26084226,26084753-26084819,
26085011-26085192,26085315-26085444
Length = 200
Score = 105 bits (253), Expect = 1e-23
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +1
Query: 217 RGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRK 396
+G LMPNIGYGS+KKTRH LPN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK
Sbjct: 115 KGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRK 174
Query: 397 LIVEKS 414
IVE++
Sbjct: 175 EIVERA 180
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3
Query: 168 NWRKPRGIDNRVRRRFKGSIL 230
+WR+P+GID+RVRR+FKG L
Sbjct: 99 SWRRPKGIDSRVRRKFKGCTL 119
Score = 29.9 bits (64), Expect = 0.93
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 72 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 164
MA+ P+ IVKKR K+F R SDRY LK
Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYLCLK 30
>09_04_0630 +
19104678-19105463,19106169-19106348,19107775-19107864,
19108777-19108958,19109968-19109974,19111763-19111833,
19112188-19112224,19112433-19112603
Length = 507
Score = 72.9 bits (171), Expect = 1e-13
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +1
Query: 217 RGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNR 348
+G LMPNIGYGS+KKTRH LPN F+K +VHNV ELE+LMM NR
Sbjct: 370 KGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNR 413
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +3
Query: 60 ETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGSIL 230
+TY+M + P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG L
Sbjct: 319 DTYEMVV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTL 374
>12_01_0973 -
9803378-9803724,9804057-9804163,9804208-9804443,
9804513-9804799,9806226-9806331
Length = 360
Score = 29.9 bits (64), Expect = 0.93
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +3
Query: 150 YDKLKRNWRKPRGIDNRVRRRFKGSILDAQHRLRFQQEDPSYAPKW 287
+ K++R W G DNR+ ++ + + L F+ P P++
Sbjct: 79 FKKIRRTWFPSNGTDNRIVKKITNNCSQVRSLLFFENPKPKQIPQF 124
>07_03_0906 +
22481456-22481802,22482105-22482186,22482299-22482400,
22483005-22483315,22483948-22484044,22484522-22484696,
22485074-22485150,22485632-22486027,22486254-22486303,
22487315-22487382,22488142-22488701
Length = 754
Score = 29.9 bits (64), Expect = 0.93
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +3
Query: 96 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPRG-IDNRVRRRFKGSI----LDAQHRLRFQQ 260
P+ + + ++ +DR D ++WR P G ++ R+ S+ D Q RL F+
Sbjct: 179 PSQIWSSSMHMAQNVADRKDNFVKSWRPPAGQFSSQWRQNNMWSMSTMQSDLQQRLAFEF 238
Query: 261 EDPSYAPKWIP 293
+ PS + K +P
Sbjct: 239 DRPSGSEKLLP 249
>02_04_0109 + 19812544-19814474,19814574-19814607
Length = 654
Score = 28.7 bits (61), Expect = 2.2
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +1
Query: 4 FSLLVRPCHRXGSLSRFLKKHTRWL*DL-FTGRQSSKRGRRDLSGINRIAMTNLRGIGVN 180
FS HR ++SR K+HTR + T ++S KR R S RG ++
Sbjct: 339 FSDRTSHAHRLSNVSREDKRHTRCSESIPQTPKESRKRSRSKRS----------RGSSLS 388
Query: 181 LEVLTTESAGD-SRGQYLMP-NIGYGSNKKTRHMLPNGFRKVLVHNVKEL 324
+ T+ S SR + P + + S+K + P G R + V NV L
Sbjct: 389 SDRSTSHSTSKCSRSRAHSPSHSAHSSSKSFQPTQPEGLRSMAVSNVSPL 438
>07_03_0808 - 21668100-21669092
Length = 330
Score = 28.3 bits (60), Expect = 2.9
Identities = 24/85 (28%), Positives = 35/85 (41%)
Frame = +3
Query: 177 KPRGIDNRVRRRFKGSILDAQHRLRFQQEDPSYAPKWIP*GPSSQC*RAGNLDDAKQEVL 356
+PR R RR +G QH+ + PS AP+ P P S R + +
Sbjct: 133 QPRARRPRRPRRARGH----QHQPALRHLPPSTAPRRTPPPPGSASPRPSSPESFSSATG 188
Query: 357 RRDRSRCLFEKAEADRGKEPSSSAS 431
R RS C + A K+ + S+S
Sbjct: 189 ARFRSTCFSTRYSAIPSKKEARSSS 213
>08_02_1245 - 25557201-25558199
Length = 332
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -2
Query: 209 PADSVVNTSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLVCFFKKRDSEPXR 30
P D V++T F K + + DK+ D C P ++H + ++ K EP R
Sbjct: 164 PKDVVISTWHFMN---KVIEGFSIDFDKAFELFVDGCSPFGPIWNHYLGYWNKHVEEPDR 220
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 423 SCWALFHDQLPLFRRDTVSDLCAVLPVLHHQDFQLFNIVN*DLT 292
S +L D LP FR+D +C P L F+L V ++T
Sbjct: 112 SSGSLEKDMLPPFRQDIQKFICIKRPTLPETSFELLRKVYPEIT 155
>08_02_0797 +
21307534-21307639,21307907-21308988,21309385-21309432,
21309705-21310217
Length = 582
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 114 RTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGSILDAQHRL 248
R+ R ++ + RY + WR+ G D+ V S++DA+ RL
Sbjct: 292 RSDRQLQGELVRYLARREEWRRWGGADHLVVPHHPNSMMDARRRL 336
>04_04_1065 + 30529555-30530076
Length = 173
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +3
Query: 81 RPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGSILDAQHRLRFQQ 260
RP+ P K +K + D+L W + N++ IL+ Q R+R +
Sbjct: 72 RPLTMPPGYKNFSKELLACFPVPVDQLDDYWARK----NKIHDEGAKPILEEQERIRKEY 127
Query: 261 EDPSYAPKWI 290
+ YA WI
Sbjct: 128 NEKGYAEYWI 137
>01_06_1513 -
37884198-37884485,37884966-37886951,37886976-37887305,
37887397-37887471,37887543-37887734,37887922-37888173,
37888248-37888803,37888881-37889088,37889624-37889736,
37890029-37890060,37890545-37890619
Length = 1368
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +1
Query: 235 PNIGYGSNKKTRHMLPNGFRKVL---VHNVKEL---EILMMQNRKYCAEIAH 372
P ++K+R + NGFRKV HN L ++L+ N KY A H
Sbjct: 270 PRCDVQESEKSRRVGNNGFRKVCFWQFHNFHMLLGSDLLIFSNEKYMAVSLH 321
>10_08_0643 +
19541991-19542188,19543261-19543515,19543598-19543722,
19543815-19543859,19544618-19544699,19545099-19545167,
19545276-19545446,19545530-19545595,19546236-19546273,
19547478-19547759,19548286-19548419,19548887-19548981,
19549083-19549127,19549250-19549309,19549483-19549584,
19549852-19549903,19549982-19550034,19550138-19550202,
19550579-19550630,19550780-19550857
Length = 688
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +1
Query: 193 TTESAGDSRGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHN 312
TT + D +G + +G N ++PNG+ N
Sbjct: 355 TTAANSDGKGDFSFEAFDFGENNVDTKIMPNGYENARSEN 394
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 108 KKRTKRFIRHQ--SDRYDKLKRNWRKPRGIDNRVRRRFKGSILDAQHRLRFQQE 263
++R + ++ + SD D KR R ++ R RRR + D +LR ++E
Sbjct: 522 RERKREIMKQEDDSDEEDNRKRRRRSSGTLEERKRRRLREKEEDLADKLREEEE 575
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,355,692
Number of Sequences: 37544
Number of extensions: 224535
Number of successful extensions: 703
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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