Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_G11
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 89 1e-18
Z49907-5|CAA90087.1| 327|Caenorhabditis elegans Hypothetical pr... 31 0.48
AL132848-1|CAB60388.2| 381|Caenorhabditis elegans Hypothetical ... 29 1.5
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 27 4.5
Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 27 7.9
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 7.9
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 89.0 bits (211), Expect = 1e-18
Identities = 39/66 (59%), Positives = 54/66 (81%)
Frame = +1
Query: 217 RGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRK 396
RG MP IG+GS+++TR +LPNG++KVLV NVK+L++L+MQ+ KY EI HGVS+K RK
Sbjct: 49 RGMRAMPTIGHGSDRRTRFVLPNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRK 108
Query: 397 LIVEKS 414
IVE++
Sbjct: 109 GIVERA 114
Score = 63.7 bits (148), Expect = 6e-11
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +3
Query: 102 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKG 221
+VKK+ +F RH+SDRY ++ +WRKP+GIDNRVRRRF+G
Sbjct: 11 VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRG 50
>Z49907-5|CAA90087.1| 327|Caenorhabditis elegans Hypothetical
protein B0491.5 protein.
Length = 327
Score = 30.7 bits (66), Expect = 0.48
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 141 SDRYDKLKRNWRKPRGIDNRVRRRFKGSILDAQHRLRFQQEDPS-YAPK 284
SDR K + +W K G+++ V R K + +R RF++EDP Y PK
Sbjct: 24 SDREYKGRADWWKEPGLEDSVTRSGKLRL----YRARFREEDPDWYDPK 68
>AL132848-1|CAB60388.2| 381|Caenorhabditis elegans Hypothetical
protein Y47H10A.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 223 QYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQN 345
QYLM NI R P+GF K L+ + L+I QN
Sbjct: 213 QYLMNNIDLKYGLLIRCWHPSGFDKELLSGIPRLDIFYAQN 253
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
K07G5.3 protein.
Length = 1202
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = -2
Query: 245 PMLGIKY*PLESPADSVVNTSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLV 66
P+ + PLES + V R++ +P +++ +R+ ++ ++ FD+ R HLV
Sbjct: 1052 PLFNVNEEPLESIQTATV---RYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLV 1108
Query: 65 CFFKKRD 45
+ R+
Sbjct: 1109 AARQLRE 1115
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 150 YDKLKRNWRKPRGIDNRVRRRFKGSILDAQHRL--RFQQEDPSYAP 281
YD +K+NW K + R R + L+ + R R ++E P +P
Sbjct: 37 YDDIKKNWHKRWFDTSNFRERMENLTLEGKRRSPPRVRREPPMRSP 82
>Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical
protein K04G2.10 protein.
Length = 319
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 68 QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 172
QD K + D+RQKE E Y+ IGS+ + E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 26.6 bits (56), Expect = 7.9
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +1
Query: 94 GRQSSKRGRRDLSGINRIAMTNLRGIGVNLEVLTTESAGDSRGQYLMPNIGYGSNKKTRH 273
G+ RG ++ +R+A ++GI E+L S G + G ++ G GS K
Sbjct: 989 GKLLLARGEISVTYFDRLATLFMKGIDEPEEILRASSCG-AFGNLMIATRGRGSEK---- 1043
Query: 274 MLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 402
L F K++ N+ ++ + R I H + S R ++
Sbjct: 1044 WLGQVFHKIV--NIIRVDRSPLVRRSAADLIRHSLQSTGRDML 1084
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 57 KETYKMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 212
K+ + A++P +R TI+ +R K ++ DRY K K+ + K + +RR
Sbjct: 387 KKKHMTALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,629,407
Number of Sequences: 27780
Number of extensions: 192269
Number of successful extensions: 513
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -