Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_G08
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 185 2e-47
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 67 9e-12
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 67 9e-12
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 64 8e-11
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 63 1e-10
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 60 1e-09
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 57 9e-09
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 54 5e-08
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 53 2e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 52 3e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 52 3e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 52 3e-07
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 51 5e-07
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 51 5e-07
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 51 5e-07
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 51 5e-07
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 51 5e-07
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 51 5e-07
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 51 5e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 51 6e-07
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 51 6e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 48 4e-06
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 48 4e-06
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 48 6e-06
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 48 6e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 7e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 46 2e-05
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 46 2e-05
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 46 2e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 5e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 44 7e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 44 7e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 44 7e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 44 9e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 44 9e-05
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 43 1e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 2e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 42 3e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 42 3e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 3e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 42 3e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 42 4e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 42 4e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 42 4e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 42 4e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 41 5e-04
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 38 0.003
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.005
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.005
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 38 0.005
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 38 0.005
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 37 0.008
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 37 0.011
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 36 0.014
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 36 0.014
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 36 0.014
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.014
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 36 0.018
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 36 0.018
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 35 0.032
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 35 0.032
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.043
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.043
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.099
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 33 0.17
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 33 0.17
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 31 0.40
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 0.40
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.40
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 0.53
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 30 0.92
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 30 0.92
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 29 2.1
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 2.1
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 29 2.1
Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical pr... 28 3.7
U67953-6|ABA00176.1| 287|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF003384-2|AAL08040.1| 428|Caenorhabditis elegans Acyltransfera... 27 6.5
AF003384-1|AAK71374.2| 415|Caenorhabditis elegans Acyltransfera... 27 6.5
U53332-4|ABS83852.1| 215|Caenorhabditis elegans Hypothetical pr... 27 8.6
U53332-3|ABS83853.1| 218|Caenorhabditis elegans Hypothetical pr... 27 8.6
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 27 8.6
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 185 bits (451), Expect = 2e-47
Identities = 86/141 (60%), Positives = 105/141 (74%), Gaps = 4/141 (2%)
Frame = +3
Query: 105 MNPMTNVKNVLKLSERELG----SSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQ 272
MNP+TN+KN +++EREL K SWH YKDSAWI++GGL Y L+EGDVI VFSQ
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 273 YGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQYKVP 452
YGE++NIN++RDK TGK KGFAFLCY+DQRSTILAVDN N I + R +RVDH E+YKVP
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDHVEEYKVP 120
Query: 453 NAHMSKIDEVTAAITMEGCAP 515
+ D+ T + EGCAP
Sbjct: 121 K-YKEDADDETKRLWEEGCAP 140
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 74.9 bits (176), Expect = 3e-14
Identities = 31/73 (42%), Positives = 51/73 (69%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG + YD++E + +FS+ G +++I MV D+ TGKPKG+ F+ + D ++ +A+ NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 390 NSIKILGRTLRVD 428
N ++ GR LRVD
Sbjct: 80 NGYELSGRILRVD 92
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 66.9 bits (156), Expect = 9e-12
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++VG P+ TE D+ FSQ G + N+ +V D+ TG+P+GFAF+ + ++ + AVD
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 390 NSIKILGRTLRVD 428
N + GR LRV+
Sbjct: 66 NGVDFNGRALRVN 78
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 66.9 bits (156), Expect = 9e-12
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 165 SSKTSWHDQYKDSAWI-FVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAF 341
SS TS Q WI FV + + TE DV FS+YG+I NI++ D+ TG KG+A
Sbjct: 41 SSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYAL 100
Query: 342 LCYEDQRSTILAVDNLNSIKILGRTLRVDHC 434
+ YE Q+ A+D N +LG+ ++VD C
Sbjct: 101 VEYETQKEANEAIDQSNDTDLLGQNVKVDWC 131
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++VG +PY TE ++ F+ G + N+ +V D+ TG+P+GFAF+ + ++ AV+ L
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 390 NSIKILGRTLRVDHCEQ 440
N + GR LRV++ +
Sbjct: 68 NGVAFNGRNLRVNYANK 84
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 63.7 bits (148), Expect = 8e-11
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 195 KDSAWIFVGGLPYDLTEGDVICVFS-QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTI 371
KD A IFVG LP+++TE +I FS Q G + + +VRDK TGK KGFAF+ ++ S
Sbjct: 244 KDMA-IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Query: 372 LAVDNLNSIKILGRTLRV 425
LA+ ++ +IK+ R LR+
Sbjct: 303 LAL-SMETIKMEKRDLRI 319
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINM 299
+FVG +P + E V +FS +G I ++ M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++VG P+ TE ++ FS G+I N+ +V D+ TG+P+GFAF+ + ++ S AV+ +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 390 NSIKILGRTLRVD 428
N + GR LRV+
Sbjct: 67 NGAEFNGRPLRVN 79
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/73 (32%), Positives = 47/73 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++VGG D+TE ++ F +G++V I++ D +GK +GF F+ ++ +A+DN+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 390 NSIKILGRTLRVD 428
N ++ G+T+RV+
Sbjct: 73 NESELFGKTIRVN 85
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +3
Query: 216 VGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNS 395
V LP ++ E ++ +F + G ++ I + RDK TG PKGFAF+ +E + A+ LN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 396 IKILGRTLRVD 428
I++ L+V+
Sbjct: 240 IRMYHMVLKVE 250
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+ + LP +T+ +V +F+ GEI + +VRDK TG+ G+ F+ Y + + AV +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 390 NSIKILGRTLRVDHC----EQYKVPNAHMSKI 473
N +++ +T++V + +Q K N ++S I
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGI 135
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/88 (27%), Positives = 46/88 (52%)
Frame = +3
Query: 129 NVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRD 308
N L+L + + S +DQ K S ++V G+P +T ++ +F +G+I+ ++ D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSN-LYVSGIPKSMTLHELESIFRPFGQIITSRILSD 162
Query: 309 KTTGKPKGFAFLCYEDQRSTILAVDNLN 392
TG KG F+ ++ + +A+ LN
Sbjct: 163 NVTGLSKGVGFVRFDKKDEADVAIKTLN 190
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FV L D + + +FSQ+G IVN+ ++RD T + KG+AF+ + A+ +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 390 NSIKILGRTLRV 425
N + G+TL+V
Sbjct: 435 NGTNLAGKTLQV 446
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG + Y+ +E + F YG+I + MV D+ GKP+G+AF+ Y D+ A
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEA-GKPRGYAFIEYSDKAEMHTAYKKA 164
Query: 390 NSIKILGRTLRVDH 431
+ IK+ G+ L VD+
Sbjct: 165 DGIKVDGKRLVVDY 178
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D+ +FVG +P +L E D+ +F Q+G+I +++DK TG KG AFL Y + S +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
Query: 378 VDNLNSIKIL---GRTLRVDHCEQYKVPNAHMSKIDEVTAAITM 500
L+ K L R ++V + P + K+D+ I M
Sbjct: 87 QATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGM 130
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D +F+G L +E +V +F+ +GE+ + ++R G KG AF+ Y+ +A
Sbjct: 122 DDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKYKHGLDAHMA 180
Query: 378 VDNLN 392
+ L+
Sbjct: 181 ISALH 185
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D+ +FVG +P +L E D+ +F Q+G+I +++DK TG KG AFL Y + S +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
Query: 378 VDNLNSIKIL---GRTLRVDHCEQYKVPNAHMSKIDEVTAAITM 500
L+ K L R ++V + P + K+D+ I M
Sbjct: 87 QATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGM 130
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D +F+G L +E +V +F+ +GE+ + ++R G KG AF+ Y+ +A
Sbjct: 122 DDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKYKHGLDAHMA 180
Query: 378 VDNLN 392
+ L+
Sbjct: 181 ISALH 185
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
I+VG + +++ E + F +G I +INM D TG K FAF+ YE + +LA +++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 390 NSIKILGRTLRVD 428
N + GR L+V+
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++V + DL+E D+ VF +GEIV + R T +GF +L + + S A+ +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 390 NSIKILGRTLR 422
N + G+ LR
Sbjct: 269 NMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
I+VG + +++ E + F +G I +INM D TG K FAF+ YE + +LA +++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 390 NSIKILGRTLRVD 428
N + GR L+V+
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 47.2 bits (107), Expect = 7e-06
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++V + DL+E D+ VF +GEIV + R T +GF +L + + S A+ +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 390 NSIKILGRTLRVDHCEQYKVPNAHM--SKIDEVTAAITMEGCAPVAPKI 530
N + G+ LRV C ++ + + + A++++ CA + K+
Sbjct: 269 NMFDLGGQYLRVGKCVTPPDALTYLQPASVSAIPASVSV-ACAAITAKV 316
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
I+VG + +++ E + F +G I +INM D TG K FAF+ YE + +LA +++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 390 NSIKILGRTLRVD 428
N + GR L+V+
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 47.2 bits (107), Expect = 7e-06
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++V + DL+E D+ VF +GEIV + R T +GF +L + + S A+ +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 390 NSIKILGRTLRVDHCEQYKVPNAHM--SKIDEVTAAITMEGCAPVAPKI 530
N + G+ LRV C ++ + + + A++++ CA + K+
Sbjct: 269 NMFDLGGQYLRVGKCVTPPDALTYLQPASVSAIPASVSV-ACAAITAKV 316
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 90 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 269
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 270 QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKIL 407
+YG + + N++RDK+T KG F+ + ++ I A L++IK++
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVI 122
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S A
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 378 VDNLNSIKILGRTLRV 425
+ +N +I + L+V
Sbjct: 557 ISAMNGFQIGSKRLKV 572
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/61 (24%), Positives = 37/61 (60%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++ ++A +
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 390 N 392
+
Sbjct: 203 H 203
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 90 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 269
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 270 QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKIL 407
+YG + + N++RDK+T KG F+ + ++ I A L++IK++
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVI 122
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S A
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 378 VDNLNSIKILGRTLRV 425
+ +N +I + L+V
Sbjct: 557 ISAMNGFQIGSKRLKV 572
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/61 (24%), Positives = 37/61 (60%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++ ++A +
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 390 N 392
+
Sbjct: 203 H 203
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 90 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 269
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 270 QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKIL 407
+YG + + N++RDK+T KG F+ + ++ I A L++IK++
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVI 122
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S A
Sbjct: 426 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 485
Query: 378 VDNLNSIKILGRTLRV 425
+ +N +I + L+V
Sbjct: 486 ISAMNGFQIGSKRLKV 501
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/61 (24%), Positives = 37/61 (60%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++ ++A +
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 390 N 392
+
Sbjct: 203 H 203
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 90 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 269
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 270 QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKIL 407
+YG + + N++RDK+T KG F+ + ++ I A L++IK++
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVI 122
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/61 (24%), Positives = 37/61 (60%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++ ++A +
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 390 N 392
+
Sbjct: 203 H 203
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 90 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 269
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 270 QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKIL 407
+YG + + N++RDK+T KG F+ + ++ I A L++IK++
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVI 122
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/61 (24%), Positives = 37/61 (60%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++ ++A +
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 390 N 392
+
Sbjct: 203 H 203
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 90 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 269
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 270 QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKIL 407
+YG + + N++RDK+T KG F+ + ++ I A L++IK++
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVI 122
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 90 VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFS 269
V P+ + + N K+ + + S S D D+ +FVG +P E D +F
Sbjct: 19 VVPIAESTVINAKDTTPSTAADNDVSPSPSEPDT--DAIKMFVGQIPRQWNETDCRRLFE 76
Query: 270 QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKIL 407
+YG + + N++RDK+T KG F+ + ++ I A L++IK++
Sbjct: 77 KYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVI 122
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S A
Sbjct: 497 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 378 VDNLNSIKILGRTLRV 425
+ +N +I + L+V
Sbjct: 557 ISAMNGFQIGSKRLKV 572
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/61 (24%), Positives = 37/61 (60%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+F+G L E ++ +F+++G I + +++RD+ GK +G AF+ + ++ ++A +
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 390 N 392
+
Sbjct: 203 H 203
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/81 (29%), Positives = 46/81 (56%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A I+VGGL ++E + + Q G +V++NM +D+ T +GF F+ + + A+
Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
Query: 384 NLNSIKILGRTLRVDHCEQYK 446
LN IK+ G+ ++V+ ++
Sbjct: 73 ILNMIKLYGKPIKVNKASAHE 93
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +3
Query: 123 VKNVLKLSERELGSSSKTSWHDQYKD-SAWIFVGGLPYDLTEGDVICVFSQYGEIVNI-N 296
+ N++KL + + +K S H++ D A IFVG L ++ E + FS +G I+ +
Sbjct: 73 ILNMIKLYGKPI-KVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPK 131
Query: 297 MVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDH 431
++RD +G KGFAF+ + ++ A++ +N + R + V +
Sbjct: 132 IMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSY 176
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D A +F+ LP D + D+I F+ +G I++ + DK T K F F+ YE+ +S A
Sbjct: 333 DGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 392
Query: 378 VDNLNSIKILGRTLRV 425
+ +N +I + L+V
Sbjct: 393 ISAMNGFQIGSKRLKV 408
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/81 (29%), Positives = 46/81 (56%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A I+VGGL ++E + + Q G +V++NM +D+ T +GF F+ + + A+
Sbjct: 23 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 82
Query: 384 NLNSIKILGRTLRVDHCEQYK 446
LN IK+ G+ ++V+ ++
Sbjct: 83 ILNMIKLYGKPIKVNKASAHE 103
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +3
Query: 123 VKNVLKLSERELGSSSKTSWHDQYKD-SAWIFVGGLPYDLTEGDVICVFSQYGEIVNI-N 296
+ N++KL + + +K S H++ D A IFVG L ++ E + FS +G I+ +
Sbjct: 83 ILNMIKLYGKPI-KVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPK 141
Query: 297 MVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDH 431
++RD +G KGFAF+ + ++ A++ +N + R + V +
Sbjct: 142 IMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSY 186
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+F+ LPY E D+ +F +YGE+ + +V DK TG KGFA + + + + A L
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 390 NSIKILGRTLRV 425
+ GR + +
Sbjct: 341 DGYVFKGRMMHI 352
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 165 SSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVF-SQYGEIVNINMVRDK 311
SSK + + + +FV L +D T+G + +F +YG++V + K
Sbjct: 628 SSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKK 677
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +3
Query: 213 FVGGLPYDLTEGDV-----ICVFS-QYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTIL 374
F+GGLPYD D+ C F+ + + +I++V D+ +G KGFA++ +E+++
Sbjct: 9 FIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNT 68
Query: 375 AVDNLNSIKILGRTLRVDHCEQ 440
A+ LN R L+V+ +Q
Sbjct: 69 AISGLNGADFGNRVLKVNRAQQ 90
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 195 KDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
+++ +FVGGLP D +E D+ F Q+G++ +I DK T + FAF+ +E++ S
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEES 163
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 344
IFVGG+ ++ D+ F+QYGE+ + D+T G+ +GFAF+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 195 KDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
+++ +FVGGLP D +E D+ F Q+G++ +I DK T + FAF+ +E++ S
Sbjct: 107 RENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEES 163
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 344
IFVGG+ ++ D+ F+QYGE+ + D+T G+ +GFAF+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +3
Query: 216 VGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNS 395
+ L Y T D+ F +YG+I ++++ RDK + + KGF F+ + ++R A+D +
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 396 IKILGRTLRV 425
+ GR LRV
Sbjct: 83 KLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +3
Query: 216 VGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNS 395
+ L Y T D+ F +YG+I ++++ RDK + + KGF F+ + ++R A+D +
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 396 IKILGRTLRV 425
+ GR LRV
Sbjct: 83 KLVDGRELRV 92
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 47.2 bits (107), Expect = 7e-06
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IFVGGLPY ++ + F Q+G+I ++ D+ T K +G+ F+ +D+ S A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 390 NSIKILGRTLRVD 428
N I I GR V+
Sbjct: 97 NPI-IDGRKANVN 108
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FV L + + +FS++GEI + ++ D GKPKGF F+ + DQ + AV+ L
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKL 298
Query: 390 NSIKILGRTLRVDHCEQYK 446
N + G ++ C K
Sbjct: 299 NDSILEGTDCKLSVCRAQK 317
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A +++G L D++E + FS G +++I + RD T+ G+A++ ++ A+D
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 116
Query: 384 NLNSIKILGRTLRV 425
+N I GR +R+
Sbjct: 117 TMNFEVIHGRPMRI 130
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++V + DL + + FS +G I + ++ D+ G+ KGF F+C+E AV ++
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTDM 403
Query: 390 NSIKILG 410
NS K++G
Sbjct: 404 NS-KMIG 409
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FV L + + +FS++GEI + ++ D GKPKGF F+ + DQ + AV+ L
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKL 298
Query: 390 NSIKILGRTLRVDHCEQYK 446
N + G ++ C K
Sbjct: 299 NDSILEGTDCKLSVCRAQK 317
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A +++G L D++E + FS G +++I + RD T+ G+A++ ++ A+D
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 116
Query: 384 NLNSIKILGRTLRV 425
+N I GR +R+
Sbjct: 117 TMNFEVIHGRPMRI 130
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++V + DL + + FS +G I + ++ D+ G+ KGF F+C+E AV ++
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTDM 403
Query: 390 NSIKILG 410
NS K++G
Sbjct: 404 NS-KMIG 409
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A ++VGGLP D T ++ +F ++G I + + R +P GFAF+ Y+D R AV
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAVR 57
Query: 384 NLNSIKILGRTLRVD 428
L+ +I G RV+
Sbjct: 58 ALDGSRICGVRARVE 72
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A ++VGGLP D T ++ +F ++G I + + R +P GFAF+ Y+D R AV
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAVR 57
Query: 384 NLNSIKILGRTLRVD 428
L+ +I G RV+
Sbjct: 58 ALDGSRICGVRARVE 72
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A ++VGGLP D T ++ +F ++G I + + R +P GFAF+ Y+D R AV
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAVR 57
Query: 384 NLNSIKILGRTLRVD 428
L+ +I G RV+
Sbjct: 58 ALDGSRICGVRARVE 72
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG L ++ + F ++GE+ ++RD T K KG+ F+ Y + A+D +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 390 NSIKILGRTLRVD 428
N + RT+R +
Sbjct: 194 NGAWLGRRTIRTN 206
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Frame = +3
Query: 60 NFNSLNREP*VKPVIMNPMTNVKNVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDL 239
+ N + E I N M N+ S+ S T D+ ++VG + Y
Sbjct: 30 DLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGA 89
Query: 240 TEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTL 419
T ++ F G + + + D+ +G PKGFA++ + ++ A+ +S+ + GR +
Sbjct: 90 TAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSL-LRGRQI 148
Query: 420 RVD 428
+VD
Sbjct: 149 KVD 151
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +3
Query: 183 HDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 362
HD +F+GGL +D T+ + FSQ+G +V+ ++RD T +GF F+ +
Sbjct: 42 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 101
Query: 363 STILAVDNLNSIKILGRTL 419
S A+ N K+ G+T+
Sbjct: 102 SAESAM-NDRPHKLGGKTV 119
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +3
Query: 183 HDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 362
HD +F+GGL +D T+ + FSQ+G +V+ ++RD T +GF F+ +
Sbjct: 62 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 121
Query: 363 STILAVDNLNSIKILGRTL 419
S A+ N K+ G+T+
Sbjct: 122 SAESAM-NDRPHKLGGKTV 139
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +3
Query: 183 HDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQR 362
HD +F+GGL +D T+ + FSQ+G +V+ ++RD T +GF F+ +
Sbjct: 63 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 122
Query: 363 STILAVDNLNSIKILGRTL 419
S A+ N K+ G+T+
Sbjct: 123 SAESAM-NDRPHKLGGKTV 140
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IFVGGL + T+ + +SQ+GEI +I ++RD TT + +GF F+ + + A+
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 390 NSIKILGRTL 419
I I G+T+
Sbjct: 85 PHI-IDGKTV 93
Score = 43.6 bits (98), Expect = 9e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IFVGGL + T+ + +SQ+GEI +I ++RD TT + +GF F+ + + A+
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 390 NSIKILGRTL 419
I I G+T+
Sbjct: 85 PHI-IDGKTV 93
Score = 43.6 bits (98), Expect = 9e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IFVGGL + T+ + +SQ+GEI +I ++RD TT + +GF F+ + + A+
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 390 NSIKILGRTL 419
I I G+T+
Sbjct: 85 PHI-IDGKTV 93
Score = 43.6 bits (98), Expect = 9e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 43.6 bits (98), Expect = 9e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
Score = 35.1 bits (77), Expect = 0.032
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 264 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTL 419
+SQ+GEI +I ++RD TT + +GF F+ + + A+ I I G+T+
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTV 55
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 43.6 bits (98), Expect = 9e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
++V G+ D TE + F++YG + ++ DK T KP+GF F+ ++D S
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
Score = 35.1 bits (77), Expect = 0.032
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 264 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTL 419
+SQ+GEI +I ++RD TT + +GF F+ + + A+ I I G+T+
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTV 55
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +3
Query: 195 KDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTIL 374
+ S ++VG L Y E V +F + G++ + M D+ P GF F+ Y + L
Sbjct: 34 RTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAEL 93
Query: 375 AVDNLNSIKILGRTLRVD 428
A+ N+++ ++ R +R D
Sbjct: 94 ALQNISNTRMDDRVIRAD 111
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +3
Query: 147 ERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKP 326
E L + S H +D +F+GGL + T ++ F ++GE+ ++RD T +
Sbjct: 27 EARLNADSDDGSHGS-QDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRA 85
Query: 327 KGFAFLCYEDQRSTILAVDN 386
+GF F+ + D S ++N
Sbjct: 86 RGFGFITFVDPSSVDKVLNN 105
Score = 35.9 bits (79), Expect = 0.018
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 353
+F+GGL T D+ F YG++ + ++ DK T + +GF F+ ++
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +3
Query: 147 ERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKP 326
E L + S H +D +F+GGL + T ++ F ++GE+ ++RD T +
Sbjct: 27 EARLNADSDDGSHGS-QDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRA 85
Query: 327 KGFAFLCYEDQRSTILAVDN 386
+GF F+ + D S ++N
Sbjct: 86 RGFGFITFVDPSSVDKVLNN 105
Score = 35.9 bits (79), Expect = 0.018
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 353
+F+GGL T D+ F YG++ + ++ DK T + +GF F+ ++
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG L D++ + F+++GE+ ++RD T K KG+ F+ + ++++ A+ +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 390 NSIKILGRTLRVD 428
N I R +R +
Sbjct: 197 NGKWIGKRAVRTN 209
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/106 (22%), Positives = 49/106 (46%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILA 377
D+ ++VG + T+ D+ +FS YG+I + + K + +AF+ YE + A
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKA 288
Query: 378 VDNLNSIKILGRTLRVDHCEQYKVPNAHMSKIDEVTAAITMEGCAP 515
+ +N ++ G +R VPN ++ + +++ M P
Sbjct: 289 IMEMNGKEMAGNQVRCSWGRTQAVPNQALNPLPIDLSSLMMPTMLP 334
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y + A++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 390 NSIKILGRTLRVD 428
N + RT+R +
Sbjct: 84 NGQWLGRRTIRTN 96
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y + A++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 390 NSIKILGRTLRVD 428
N + RT+R +
Sbjct: 94 NGQWLGRRTIRTN 106
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y + A++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 390 NSIKILGRTLRVD 428
N + RT+R +
Sbjct: 197 NGQWLGRRTIRTN 209
Score = 37.5 bits (83), Expect = 0.006
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++VG L +TE + +F+Q G + ++ D G +AF+ + D A+ +
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQTM 104
Query: 390 NSIKILGRTLRVDHCEQYKVPNAHMSKID 476
N +L R ++V+ + P SKID
Sbjct: 105 NKRLLLDREMKVNWAVE---PGQQQSKID 130
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG L ++ + F +G++ + ++RD T K KG+ F+ Y + A++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 390 NSIKILGRTLRVD 428
N + RT+R +
Sbjct: 165 NGQWLGRRTIRTN 177
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++VG LP D+ E +V +F +YG I + D +G+ FAF+ +ED R AV
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 390 NSIKILGRTLRVD 428
+ + GR +RV+
Sbjct: 67 DGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
++VG LP D+ E +V +F +YG I + D +G+ FAF+ +ED R AV
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 390 NSIKILGRTLRVD 428
+ + GR +RV+
Sbjct: 67 DGYEFDGRRIRVE 79
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/73 (30%), Positives = 43/73 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FV L T+ D+ +FS++G+I N +VRD+ +G +AF+ +++ +S A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 390 NSIKILGRTLRVD 428
+++ I R + VD
Sbjct: 303 DNVLIDDRRIHVD 315
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +3
Query: 240 TEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTL 419
TE D+ VF ++GEI ++V D+ +G +GF F+ + A D L + + G +
Sbjct: 88 TEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKI 147
Query: 420 RVD 428
RVD
Sbjct: 148 RVD 150
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/73 (30%), Positives = 43/73 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FV L T+ D+ +FS++G+I N +VRD+ +G +AF+ +++ +S A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 390 NSIKILGRTLRVD 428
+++ I R + VD
Sbjct: 303 DNVLIDDRRIHVD 315
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/73 (30%), Positives = 43/73 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FV L T+ D+ +FS++G+I N +VRD+ +G +AF+ +++ +S A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 390 NSIKILGRTLRVD 428
+++ I R + VD
Sbjct: 234 DNVLIDDRRIHVD 246
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/78 (21%), Positives = 43/78 (55%)
Frame = +3
Query: 225 LPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKI 404
+P+ E +++ F Q+G ++ I + R++ TG KG+A++ ++++ +A +++N +
Sbjct: 39 IPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNGYLM 98
Query: 405 LGRTLRVDHCEQYKVPNA 458
+ L + +P A
Sbjct: 99 FEQRLGCTVMKPELIPKA 116
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
I+VG +P D+ E ++ +F + G+I ++ ++ D +G +G+AF+ Y ++ A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 390 NSIKI-LGRTLRVD 428
+ +I G+ L+V+
Sbjct: 262 DGHEISTGKPLKVN 275
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 264 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQY 443
F YG I + ++ D+ G+ KGF F+C+E AV +NS + + L V ++
Sbjct: 277 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 335
Query: 444 KVPNAHM-SKIDEVTAAITMEGCAPVA 521
+ A + S+ + A++ M G P A
Sbjct: 336 EDRRAQLASQYMQRLASMRMHGNVPGA 362
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A ++VG L D+ E + FS G +++I + RD T G+A++ ++ A+D
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 384 NLNSIKILGRTLRV 425
+N + G+ +R+
Sbjct: 92 TMNFEALHGKPMRI 105
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 264 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQY 443
F YG I + ++ D+ G+ KGF F+C+E AV +NS + + L V ++
Sbjct: 274 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 332
Query: 444 KVPNAHM-SKIDEVTAAITMEGCAPVA 521
+ A + S+ + A++ M G P A
Sbjct: 333 EDRRAQLASQYMQRLASMRMHGNVPGA 359
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 264 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQY 443
F YG I + ++ D+ G+ KGF F+C+E AV +NS + + L V ++
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 395
Query: 444 KVPNAHM-SKIDEVTAAITMEGCAPVA 521
+ A + S+ + A++ M G P A
Sbjct: 396 EDRRAQLASQYMQRLASMRMHGNVPGA 422
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A ++VG L D+ E + FS G +++I + RD T G+A++ ++ A+D
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 384 NLNSIKILGRTLRV 425
+N + G+ +R+
Sbjct: 92 TMNFEALHGKPMRI 105
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T A+ L
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 390 NSIKILGRTLRVD-HCEQYKVPNAHMSKIDEVTAAITMEGCAPVAPKI 530
N +++ + L V C + N ++ A I + A A +I
Sbjct: 352 NGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEI 399
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T A+ L
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 390 NSIKILGRTLRVD-HCEQYKVPNAHMSKIDEVTAAITMEGCAPVAPKI 530
N +++ + L V C + N ++ A I + A A +I
Sbjct: 352 NGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEI 399
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T A+ L
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 326
Query: 390 NSIKILGRTLRVD-HCEQYKVPNAHMSKIDEVTAAITMEGCAPVAPKI 530
N +++ + L V C + N ++ A I + A A +I
Sbjct: 327 NGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEI 374
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
IF+GGLP LTE V + +G + ++ D + G KG+AF Y D T A+ L
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 329
Query: 390 NSIKILGRTLRVD-HCEQYKVPNAHMSKIDEVTAAITMEGCAPVAPKI 530
N +++ + L V C + N ++ A I + A A +I
Sbjct: 330 NGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEI 377
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+++ GL + + + + S+YG I + + DK T KG+ F+ +E ++ AVD L
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 168
Query: 390 NSIKILGRTLRVDHCEQ 440
N+ + + ++ EQ
Sbjct: 169 NTEGVQAQMAKLQQQEQ 185
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+++ GL + + + + S+YG I + + DK T KG+ F+ +E ++ AVD L
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
Query: 390 NSIKILGRTLRVDHCEQ 440
N+ + + ++ EQ
Sbjct: 143 NTEGVQAQMAKLQQQEQ 159
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 264 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQY 443
F YG I + ++ D+ G+ KGF F+C+E AV +NS + + L V ++
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQRK 395
Query: 444 KVPNAHM-SKIDEVTAAITMEGCAPVA 521
+ A + S+ + A++ M G P A
Sbjct: 396 EDRRAQLASQYMQRVASMRMHGNVPGA 422
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +3
Query: 204 AWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
A ++VG L D+ E + FS G +++I + RD T G+A++ ++ A+D
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 384 NLNSIKILGRTLRV 425
+N + G+ +R+
Sbjct: 92 TMNFEALHGKPMRI 105
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +3
Query: 135 LKLSERELGSSSK----TSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMV 302
++L ++ L +S K T+ + D+ ++VG + + T ++ F+ G++ + +
Sbjct: 19 MELLKQALSASKKYMAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIP 78
Query: 303 RDKTTGKPKGFAFLCYEDQRSTILAV 380
+DK TG K FAF+ ++ S LA+
Sbjct: 79 KDKFTGYQKNFAFVEFQKLESVQLAL 104
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 353
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 353
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 353
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 154
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYE 353
+F+GGLP +T ++ +FS++G ++ + + D+ G PKG A + +E
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
D+ +F+G + ++ T ++ F G+IV + +DK T K K FA++ ++D S
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSS 108
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 198 DSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRS 365
D+ +F+G + ++ T +V F G IV + +DK T K K FA++ ++D S
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSS 114
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 36.3 bits (80), Expect = 0.014
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+++G +PY+ E DV YG+I NI+M GFAF+ +ED R A +L
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHDL 55
Query: 390 NSIKILGRTLRV 425
+ + G ++R+
Sbjct: 56 DGKTMEGSSMRL 67
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.014
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+++G +PY+ E DV YG+I NI+M GFAF+ +ED R A +L
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHDL 55
Query: 390 NSIKILGRTLRV 425
+ + G ++R+
Sbjct: 56 DGKTMEGSSMRL 67
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.014
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+++G +PY+ E DV YG+I NI+M GFAF+ +ED R A +L
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHDL 55
Query: 390 NSIKILGRTLRV 425
+ + G ++R+
Sbjct: 56 DGKTMEGSSMRL 67
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 147 ERELGSSSKTSWHDQYKDSAW---IFVGGLPYDLTEGDVICVFSQYGEI 284
+R LG SK +H + +FVGGLP + E D++ FS+YG +
Sbjct: 66 DRRLGRYSKYYYHHNVGPEVYSRKVFVGGLPSCVKESDILNFFSRYGRL 114
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
I+V +P+ E D+ +F YG ++++ +V + KGF F+ + S A L
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGS--KGFGFVTLDSIESCEKARAAL 110
Query: 390 NSIKILGRTLRV 425
+ + GR + V
Sbjct: 111 HESHVQGRIIEV 122
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
I+V +P+ E D+ +F YG ++++ +V + KGF F+ + S A L
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGS--KGFGFVTLDSIESCEKARAAL 110
Query: 390 NSIKILGRTLRV 425
+ + GR + V
Sbjct: 111 HESHVQGRIIEV 122
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 35.1 bits (77), Expect = 0.032
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Frame = +3
Query: 210 IFVGGLPYDLTEGD-----------VICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYED 356
++VG +P+D TE + + VFS G I +I M + +P GFAF+ ++
Sbjct: 19 VYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAK-----RPPGFAFVTFKR 73
Query: 357 QRSTILAVDNLNSIKILGRTLRVDHCE 437
AV LN KI +V+ CE
Sbjct: 74 TVHAFDAVKYLNGKKICDLEAKVEMCE 100
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 35.1 bits (77), Expect = 0.032
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Frame = +3
Query: 159 GSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEI---VNINMVRDK----TT 317
G +K W D ++V LP D+T+ + S+ G I + N + K
Sbjct: 164 GEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREEN 223
Query: 318 GKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVD 428
GK KG CY + S LA + L+ + GR ++V+
Sbjct: 224 GKLKGDGRCCYIKKESVELACNILDGANLNGREVKVE 260
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.043
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 359
IFVGG P TE ++ F ++ + ++ MV+ G+ KG+ F+ +E +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITFETE 116
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.7 bits (76), Expect = 0.043
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQ 359
IFVGG P TE ++ F ++ + ++ MV+ G+ KG+ F+ +E +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITFETE 117
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 33.9 bits (74), Expect = 0.075
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 156 LGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDV-ICVFSQYGEIVNINMVRDKTTGKPKG 332
+G++ ++ + ++ +F+ + Y+ D+ V + GE+ ++ D+ GKPKG
Sbjct: 29 IGAAVGSNNGNSSSNNRMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRN-GKPKG 87
Query: 333 FAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQYKVPNAHMSKIDEVT 485
A + +E + V+NL GRT+ ++ + PNA I T
Sbjct: 88 NAVVEFETREGAEKCVENLQKFDWKGRTI---IAKEIRDPNAFFRTIKTET 135
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 33.5 bits (73), Expect = 0.099
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+++G LP ++ DV F YG++ ++ M GF F+ ++DQR AV +L
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAVHDL 55
Query: 390 NSIKILG 410
N ++ G
Sbjct: 56 NGKELCG 62
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+ V +P+ E D+ +F + G +V++ ++ ++ KGF F+ ++ A
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGS--KGFGFVTMQNPDDADRARAEF 159
Query: 390 NSIKILGRTLRVDHCEQ 440
N I GR + V+ Q
Sbjct: 160 NGTTIEGRRVEVNLATQ 176
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+ V +P+ E D+ +F + G +V++ ++ ++ KGF F+ ++ A
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGS--KGFGFVTMQNPDDADRARAEF 159
Query: 390 NSIKILGRTLRVDHCEQ 440
N I GR + V+ Q
Sbjct: 160 NGTTIEGRRVEVNLATQ 176
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 264 FSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVD 383
F +YG I ++NM D TG +GFA + ++ + A++
Sbjct: 45 FKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIE 84
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVI-CVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDN 386
+F+GG+P D+ C+ YG++ + + D PKG A + + ++ + A+
Sbjct: 367 VFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAIS- 425
Query: 387 LNSIKILGRTLRVDHCEQYK 446
GR ++V+H E K
Sbjct: 426 -------GRFVQVNHAENNK 438
Score = 30.7 bits (66), Expect = 0.69
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 129 NVLKLSERELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIV 287
+++ +S+ L +S K + S +F+GGLP D++E V F +G+++
Sbjct: 220 SLMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.9 bits (69), Expect = 0.30
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 201 SAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAV 380
+A I++G L ++E D+ F YG+I ++ + GF F+ ++D+R AV
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
Query: 381 DNLNSIKILGRTLRVDH 431
+LN ++ G + +D+
Sbjct: 54 HDLNGKELGGERVILDY 70
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.9 bits (69), Expect = 0.30
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 201 SAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAV 380
+A I++G L ++E D+ F YG+I ++ + GF F+ ++D+R AV
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
Query: 381 DNLNSIKILGRTLRVDH 431
+LN ++ G + +D+
Sbjct: 54 HDLNGKELGGERVILDY 70
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.30
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 201 SAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAV 380
+A I++G L ++E D+ F YG+I ++ + GF F+ ++D+R AV
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
Query: 381 DNLNSIKILGRTLRVDH 431
+LN ++ G + +D+
Sbjct: 54 HDLNGKELGGERVILDY 70
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 31.5 bits (68), Expect = 0.40
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +3
Query: 186 DQYKDSAW-IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKP-KGFAFLCYEDQ 359
+Q K W + + LP+ + D+ + S G+ V I + + K GF F+ + ++
Sbjct: 88 EQAKLKEWRLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEK 147
Query: 360 RSTILAVDNLNSIKILGRTLRVDHC---EQYKVPNAHMSK 470
+ N+ K+LGR++ D + Y+ NAH K
Sbjct: 148 ADAEKGREFFNTNKVLGRSVAADWALDKDTYET-NAHEEK 186
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.5 bits (68), Expect = 0.40
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG LP ++ E ++ +FS +G+I + KGFAFL + + A + +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 390 NSIKILGRTLRV 425
+ I GR +RV
Sbjct: 171 DGRIIHGRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 0.40
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+FVG LP ++ E ++ +FS +G+I + KGFAFL + + A + +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 390 NSIKILGRTLRV 425
+ I GR +RV
Sbjct: 171 DGRIIHGRQVRV 182
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 31.1 bits (67), Expect = 0.53
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 150 RELGSSSKTSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVN------INMVRDK 311
RE GS + + K++ +FV G+ E + VFS G+I I + D+
Sbjct: 189 REFGSDGRV----ELKET--VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDR 242
Query: 312 TTGKPKGFAFLCYEDQRSTILAVDNLN 392
TG+PKG + + D + A+ N
Sbjct: 243 NTGEPKGECMITFVDASAAQQAITMYN 269
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 30.3 bits (65), Expect = 0.92
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+ V +P+ + D+ +F ++G + ++ ++ ++ KGF F+ E + A L
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGS--KGFGFVTMERPQDAERARQEL 212
Query: 390 NSIKILGRTLRVD 428
+ I GR + V+
Sbjct: 213 HGSMIEGRKIEVN 225
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 30.3 bits (65), Expect = 0.92
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNL 389
+ V +P+ + D+ +F ++G + ++ ++ ++ KGF F+ E + A L
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGS--KGFGFVTMERPQDAERARQEL 212
Query: 390 NSIKILGRTLRVD 428
+ I GR + V+
Sbjct: 213 HGSMIEGRKIEVN 225
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +3
Query: 252 VICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDH 431
++ VF Q+GEIV++ R T K +G A + +++ + A + LN + +R+
Sbjct: 28 LVAVFKQFGEIVSVMCFR---TLKMRGQAHVIFKELPAASAAREALNGFPFYEKPMRIQF 84
Query: 432 CEQ 440
+
Sbjct: 85 ARE 87
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYG 278
IFVGG+P+D+TE + F ++G
Sbjct: 297 IFVGGVPWDITEAALKDSFGEFG 319
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 201 SAWIFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAV 380
S +I + GLP++ TE D+ F+ I + V TTG+P G A++ +++ A+
Sbjct: 63 SQYIRLRGLPFNATEKDIHEFFAGL-TIERVKFVC--TTGRPNGEAYVEFKNTEEAGKAM 119
Query: 381 DN 386
+N
Sbjct: 120 EN 121
>Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical
protein ZK662.5 protein.
Length = 598
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 333 FAFLCYEDQRSTILAVDNLNSIKILGRTLR--VDHCEQYKVPNAHMSKI 473
F C ++ T ++ + N + L R L+ +DHC++ PN +S++
Sbjct: 305 FIKFCDRIEQPTYISDETFNHLIYLQRLLQKCMDHCQELSAPNNSISQV 353
>U67953-6|ABA00176.1| 287|Caenorhabditis elegans Hypothetical
protein ZC13.10 protein.
Length = 287
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 3 DLLTSTLHDFSNYLXETLNNFNSLNR 80
D ST H+ +NYL T NN N +NR
Sbjct: 11 DQSDSTSHNSANYLSLTTNNSNYINR 36
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/62 (25%), Positives = 24/62 (38%)
Frame = -2
Query: 450 EPYTVHNDQHVMYAQES*YYSDCQLLKLLISDPHSTKMQILLVSQLFYLLPCLYLQFHHT 271
+P +D++ Y QE Y L + LI + L + + C Y FH T
Sbjct: 362 KPKVYADDEYTFYCQEKMCYGAFLLEQDLIYHQQKVHPKQLKTENVIFCNKCSYEYFHET 421
Query: 270 EK 265
K
Sbjct: 422 SK 423
>AF003384-2|AAL08040.1| 428|Caenorhabditis elegans
Acyltransferase-like protein 14,isoform b protein.
Length = 428
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 329 FWFPSCFISYHVYIYNFTILRKY 261
FWF S + Y+VY Y T + K+
Sbjct: 399 FWFGSFYAQYNVYSYLITSIAKF 421
>AF003384-1|AAK71374.2| 415|Caenorhabditis elegans
Acyltransferase-like protein 14,isoform a protein.
Length = 415
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 329 FWFPSCFISYHVYIYNFTILRKY 261
FWF S + Y+VY Y T + K+
Sbjct: 386 FWFGSFYAQYNVYSYLITSIAKF 408
>U53332-4|ABS83852.1| 215|Caenorhabditis elegans Hypothetical
protein F59G1.8a protein.
Length = 215
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 381 QLLKLLISDPHSTKMQILLVSQLFYLLPCLYLQ 283
QL +++SD H TK + S LF P L+LQ
Sbjct: 181 QLSSIILSDAHETKFSTIAHSSLF---PLLHLQ 210
>U53332-3|ABS83853.1| 218|Caenorhabditis elegans Hypothetical
protein F59G1.8b protein.
Length = 218
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 381 QLLKLLISDPHSTKMQILLVSQLFYLLPCLYLQ 283
QL +++SD H TK + S LF P L+LQ
Sbjct: 184 QLSSIILSDAHETKFSTIAHSSLF---PLLHLQ 213
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 210 IFVGGLPYDLTEGDVICVFSQYGEIVNINMVRDKTTGKPKGFAFL 344
+FVG LP ++ E ++ +FS +G+I + KGFAFL
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFL 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,989,839
Number of Sequences: 27780
Number of extensions: 251739
Number of successful extensions: 973
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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