Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_G05
(587 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 268 4e-73
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 267 9e-73
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 211 6e-56
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 151 1e-37
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 132 4e-32
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.041
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.054
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.071
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.094
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.12
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.29
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.29
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 0.38
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.50
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.50
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.2
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 1.2
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.2
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.5
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.0
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 27 2.0
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 2.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.0
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 2.7
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.7
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 3.5
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.5
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 3.5
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.5
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 26 3.5
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 3.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.5
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 26 3.5
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.5
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.5
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.5
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 4.7
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 4.7
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 4.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 6.2
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 6.2
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 6.2
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 6.2
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 6.2
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 25 6.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.2
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 8.2
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 25 8.2
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 8.2
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 8.2
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 8.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 268 bits (657), Expect = 4e-73
Identities = 130/195 (66%), Positives = 152/195 (77%)
Frame = +2
Query: 2 IEXAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 181
IE AGGVMT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+
Sbjct: 401 IETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELS 460
Query: 182 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 361
GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV EA
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEA 520
Query: 362 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLD 541
EKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLD
Sbjct: 521 EKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLD 580
Query: 542 SNQLXDKEEYEHKQK 586
SN K+E+E KQK
Sbjct: 581 SNTTAAKDEFEAKQK 595
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 267 bits (654), Expect = 9e-73
Identities = 129/195 (66%), Positives = 151/195 (77%)
Frame = +2
Query: 2 IEXAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 181
IE AGGVMT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+
Sbjct: 401 IETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELS 460
Query: 182 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 361
GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+EA
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEA 520
Query: 362 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLD 541
EKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD
Sbjct: 521 EKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLD 580
Query: 542 SNQLXDKEEYEHKQK 586
N K+EYE KQK
Sbjct: 581 HNTTAAKDEYEDKQK 595
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 211 bits (515), Expect = 6e-56
Identities = 107/198 (54%), Positives = 136/198 (68%), Gaps = 3/198 (1%)
Frame = +2
Query: 2 IEXAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 181
IE GGVMT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L
Sbjct: 430 IETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLR 489
Query: 182 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMVNE 358
GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IERMV E
Sbjct: 490 GIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKE 549
Query: 359 AEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKCNDTIKW 535
AE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD D +W
Sbjct: 550 AEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEW 609
Query: 536 LD-SNQLXDKEEYEHKQK 586
L+ + KEE+E +++
Sbjct: 610 LEIHGEDASKEEFEDQRQ 627
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 151 bits (365), Expect = 1e-37
Identities = 78/174 (44%), Positives = 107/174 (61%)
Frame = +2
Query: 2 IEXAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 181
IE GGV T LI RN +D Q V I+VF+GER + +DN L+G F+LT
Sbjct: 444 IETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLT 503
Query: 182 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 361
GI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +A
Sbjct: 504 GIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADA 562
Query: 362 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCND 523
EKYR D +KE I+ N ES C ++S ++ K+K+ + + K D
Sbjct: 563 EKYRASDMARKEAIENGNRAESVCTDIESNLDIH--KDKLDQQAVEDLRSKITD 614
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 132 bits (319), Expect = 4e-32
Identities = 66/181 (36%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Frame = +2
Query: 14 GGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 193
G V + RN +DNQ V V++GER +N LG+F+LTGIPP
Sbjct: 410 GNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPP 469
Query: 194 APRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 373
PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+ A+K++
Sbjct: 470 MPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFK 529
Query: 374 NEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI---LDKCNDTIKWLDS 544
+D + ++AK+ LESY ++++T+ + + K+ DK I L +C ++ D+
Sbjct: 530 QQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQLELEDT 589
Query: 545 N 547
N
Sbjct: 590 N 590
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.041
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 272 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 448
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 449 TMED 460
++D
Sbjct: 593 KLDD 596
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.054
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 332 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 511
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 512 K 514
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.071
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Frame = +2
Query: 206 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK------ 367
+ ++ +F + N + +I K+ N+E +K R+ E+ ++++ +K
Sbjct: 1213 IDKVRNSFFKNLNSFYEMYSIAKAENEER---FEKEKRRIMSEDRDKLIRGRQKTSIVAK 1269
Query: 368 YRN-------EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDT 526
YRN DDKQ + KN+LE+ M+ + E K D ++ LDK D
Sbjct: 1270 YRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDL 1328
Query: 527 IK 532
K
Sbjct: 1329 EK 1330
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.094
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 236 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 409
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 410 KNA 418
+A
Sbjct: 118 LDA 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.12
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 281 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 460
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 461 EKLKEKISD 487
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.9 bits (64), Expect = 0.29
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +2
Query: 257 VSAIEKSTNKENKITITNDKGRLSKEEI--ERMVNEAEKYRNEDDKQKETIQAKNALESY 430
V ++K +K++K N + E+ E ++EK ++ K + KNA ++
Sbjct: 70 VVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDAL 129
Query: 431 CFSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLXDKEEYEHKQK 586
M DE+ E S K+ K +D + LD + E+ + K+K
Sbjct: 130 ADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKK 182
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.29
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 326 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 493
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 29.5 bits (63), Expect = 0.38
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +2
Query: 314 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 490
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 491 DKQTILDKCNDTIKWLDSNQLXDKEEYEHKQK 586
++Q ++ + ++ + Q +E+ +K++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKER 170
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.50
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = +2
Query: 302 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 481
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 482 SDSDKQTILDKCNDTIKWLDSNQLXDKEEYEHKQK 586
D++++ D +K+ L + EY +QK
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.50
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 314 KGRLSKEEIERMVNEAEKYRNEDD 385
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 332 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 508
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 509 DKCNDTIKWLDSNQLXDKEEYEHKQK 586
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 1.2
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +2
Query: 260 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 439
S+I+K K T+ + + E+ + E EK + +A+ A
Sbjct: 206 SSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQ 265
Query: 440 MKSTMEDEKLKEKISDSDKQ--TILDK 514
+ +E EK KEK D D++ T+ DK
Sbjct: 266 NSAKLEKEKAKEKQKDKDQEQDTVSDK 292
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 251 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 382
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 244 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 348
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
Score = 25.0 bits (52), Expect = 8.2
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +2
Query: 242 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE---KYRNEDDKQKETIQAK 412
N I++ A + +NKI + + EE++ ++N+ K N + Q T
Sbjct: 107 NEIVDWKANNSNEKAQNKIATNKESTDILPEEVQLVLNDLNDDVKSANSANLQPITTNVV 166
Query: 413 NALESYCFSMKSTMEDEKLKE 475
N ++Y + E +K+
Sbjct: 167 NEKDAYRKDIDELPEPSNMKD 187
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 261 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 124
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 2.0
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 242 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNA 418
+GIL+ + IEK +K K+ + N+ SK+ + + + +E DK KN
Sbjct: 154 DGILSFTVIEKVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDKADLRFGVKNG 213
Query: 419 LESYCFSMKSTMEDE-KLKEKISDSDK 496
++ S ED ++E + + K
Sbjct: 214 VDMIFASFIRRAEDVIHIREVLGEEGK 240
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +2
Query: 296 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 475
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 476 KISDSDKQTILDKCNDTIK 532
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 347 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 451
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 257 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 418
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 377 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 538
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 287 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 457
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 26.2 bits (55), Expect = 3.5
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 242 NGILNVSAIEK-STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 418
NG + S K ST+ + + DK + E+I + ++Y NED+ + +++ A
Sbjct: 375 NGTESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPA 434
Query: 419 LESYCFSMKSTMEDEKLKEKISDSD 493
S+ ++ +T++ + KI +S+
Sbjct: 435 AVSFS-TITNTIQAKYSNRKIKNSN 458
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +2
Query: 329 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 481
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 482 SDSDKQTILDKCND 523
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 3.5
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +2
Query: 269 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 448
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 449 TMEDEKLKEKISDSDK 496
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 332 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 502
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 3.5
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 251 LNVS--AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 424
+NVS +EK T + +I + + + + M+++ +K R+ DDK E IQA +
Sbjct: 288 INVSEHTVEKVTIFDIRINTEDPRHSQIRSFLATMMSQ-DKIRSIDDKLTELIQAITYSQ 346
Query: 425 SYCFSMKSTMED--EKLKEKISDS--DKQTILDKCN 520
S MK E E + E I D + +LD N
Sbjct: 347 SKYDFMKKFSESPIEFINEWIESQSRDLEIVLDGTN 382
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 3.5
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = +2
Query: 350 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC---- 517
+NE + Y + + Q +T + L S C + S L + D + +L C
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 518 --NDTIKWLDSNQLXDK 562
D+IK L N+ DK
Sbjct: 888 CVKDSIKRLGDNKFEDK 904
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.5
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 308 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 484
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 485 DSDKQT 502
+D+ T
Sbjct: 695 -TDRLT 699
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 3.5
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 251 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN--EAEKYRNEDDKQKETIQAK-NAL 421
LNV +K N+IT T D S++E + N ++ D + + A
Sbjct: 10 LNVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGF 69
Query: 422 ESYCFSMKSTMEDEKLKEKISDSDKQ 499
+ + SMKS ++ +++ D++
Sbjct: 70 DEFYDSMKSAEREQMELKRLESKDRR 95
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 3.5
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 296 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 472
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 473 EKISDSDKQTILDKC 517
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 45 TLPSPLNRLRHSPPTLITNPEYSSKYLR 128
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 326 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 448
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 314 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 424
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 329 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 508
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 509 D 511
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 4.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 275 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 436
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +2
Query: 329 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 508
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 509 DKC 517
D C
Sbjct: 754 DGC 756
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 6.2
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 367
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 6.2
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 290 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 466
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 467 LKEKISDSDK 496
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 410 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 535
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 272 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 400
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.4 bits (53), Expect = 6.2
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 380 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLX 556
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 557 DK 562
DK
Sbjct: 238 DK 239
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 242 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 382
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.0 bits (52), Expect = 8.2
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 276 DFSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARS 130
+ S L IP+AS K S T G G S + P L++ + R+
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERN 527
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 8.2
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 190 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLS 68
WD G+ ++ I GHS +L L+ S L +S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNSASIS 101
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 8.2
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 323 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 493
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.0 bits (52), Expect = 8.2
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Frame = +2
Query: 230 DIDANGILNVSAIEKSTNKENKIT----ITNDKGRLSKEEIER-----MVNEAE-KYRNE 379
D+D VS IEK+T + +T N G+L K EIE ++N+ E
Sbjct: 1209 DLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKKPDVLNQVSLSIEEE 1268
Query: 380 DDKQKETIQAKNA 418
K KE+ NA
Sbjct: 1269 KPKNKESEVDNNA 1281
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 8.2
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Frame = +2
Query: 311 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 460
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 461 ---EKLKEKISDSDKQTILDKCND 523
EK++EK+++ DK ++ D D
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPD 810
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,104,667
Number of Sequences: 5004
Number of extensions: 40189
Number of successful extensions: 239
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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