Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_G03
         (356 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1133 + 9364842-9364850,9364929-9365048,9365157-9365476,936...    31   0.20 
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230...    30   0.47 
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242           29   0.81 
01_06_0886 + 32725504-32725824,32725905-32726658,32727911-327280...    29   1.1  
12_02_0640 - 21447470-21448309                                         28   1.9  
12_02_0335 - 17669232-17670063,17670619-17672150                       27   4.3  
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124...    27   4.3  
01_01_0137 + 1249081-1249341,1249500-1250237                           27   5.7  
01_01_1043 + 8228201-8228209,8228364-8228439,8228527-8228903           26   7.6  

>06_01_1133 +
           9364842-9364850,9364929-9365048,9365157-9365476,
           9366267-9366428,9367151-9367235,9367352-9367501,
           9367588-9367635,9367705-9367773,9367897-9368600,
           9369426-9369561,9369636-9369856,9370355-9370486,
           9371316-9371406,9371878-9371925,9372004-9372132,
           9372357-9372626
          Length = 897

 Score = 31.5 bits (68), Expect = 0.20
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +2

Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACPESSC 259
           C     GTC E  C CP++ C      C C +S C
Sbjct: 661 CPCLTNGTCCEKYCGCPKM-CKNRFRGCHCAKSQC 694


>03_02_0752 -
           10922456-10922644,10922719-10922796,10922888-10923016,
           10923105-10923152,10923243-10923333,10923517-10923648,
           10923869-10924086,10925121-10925271,10925360-10926009,
           10926715-10926786,10926938-10926985,10927105-10927242,
           10927750-10927756,10928064-10928212
          Length = 699

 Score = 30.3 bits (65), Expect = 0.47
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACPESSC 259
           C     GTC E  C C + SC      C C +S C
Sbjct: 464 CACVENGTCCEKYCGCSK-SCKNRFRGCHCAKSQC 497


>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
          Length = 417

 Score = 29.5 bits (63), Expect = 0.81
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 158 VSQNTGTCPESSCACPEISCACPETSCA 241
           ++++  TCP + C CPE  C     S A
Sbjct: 116 ITEHEKTCPHAPCFCPEPGCGFAAASAA 143


>01_06_0886 +
           32725504-32725824,32725905-32726658,32727911-32728033,
           32729477-32729535,32731427-32731732,32732006-32732236,
           32732332-32732484,32732567-32732836
          Length = 738

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 90  WLLPVSFPRVWXPEDPDFSGCFFGGIVT 7
           W LP S         PD  GC F GI++
Sbjct: 115 WQLPFSIVAATLSSQPDVDGCVFAGIIS 142


>12_02_0640 - 21447470-21448309
          Length = 279

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 330 AGLTGCGFCSCSFGSRGCRFGGQRQ 256
           A +T CG    S G RG R GG+RQ
Sbjct: 121 ADITSCGLPRSSRGGRGGRGGGRRQ 145


>12_02_0335 - 17669232-17670063,17670619-17672150
          Length = 787

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 173 GTCPESSCACPEISCACPETSC 238
           G C ESSC       +C +TSC
Sbjct: 581 GPCAESSCISSSCQPSCAQTSC 602


>01_01_0136 +
           1237623-1237820,1238313-1239001,1239978-1240308,
           1240614-1241351
          Length = 651

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 158 VSQNTGTCPESSCACPEISCACPETSCACP 247
           V+ +   CP + C+CPE  C    +  A P
Sbjct: 465 VADHQRACPCAPCSCPEPGCRFRSSPAALP 494


>01_01_0137 + 1249081-1249341,1249500-1250237
          Length = 332

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 173 GTCPESSCACPEISCACPETSC 238
           G   E   ACP   C+CP+  C
Sbjct: 143 GAAAEHQRACPCAPCSCPDPGC 164


>01_01_1043 + 8228201-8228209,8228364-8228439,8228527-8228903
          Length = 153

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 179 CPESSCACPEISCA-CPETSCACPE 250
           C E+ CAC ++  A C  + C+ P+
Sbjct: 97  CKEAECACVKVCAASCHHSPCSLPD 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,081,565
Number of Sequences: 37544
Number of extensions: 68524
Number of successful extensions: 360
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)