BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_G03
(356 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094792-1|AAM11145.1| 486|Drosophila melanogaster LD20987p pro... 33 0.081
AF119794-1|AAD34346.1| 486|Drosophila melanogaster TNF-receptor... 33 0.081
AF111422-1|AAG21891.1| 412|Drosophila melanogaster TRAF1 protein. 33 0.081
AF079837-1|AAD47894.1| 412|Drosophila melanogaster TRAF1 protein. 33 0.081
AE014134-724|AAN10343.1| 412|Drosophila melanogaster CG3048-PB,... 33 0.081
AE014134-723|AAF51024.1| 486|Drosophila melanogaster CG3048-PA,... 33 0.081
BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p pro... 31 0.57
BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p pro... 31 0.57
AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA... 31 0.57
AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA ... 30 1.00
BT016123-1|AAV37008.1| 591|Drosophila melanogaster LD01328p pro... 28 3.0
AY268068-1|AAQ56704.1| 591|Drosophila melanogaster UDP-GalNAc:p... 28 3.0
AY058660-1|AAL13889.1| 486|Drosophila melanogaster LD36616p pro... 28 3.0
AF493067-1|AAM62412.1| 591|Drosophila melanogaster UDP-N-acetyl... 28 3.0
AE014298-2730|AAN09470.1| 591|Drosophila melanogaster CG6394-PB... 28 3.0
AE014298-2729|AAF48851.1| 591|Drosophila melanogaster CG6394-PA... 28 3.0
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein... 28 4.0
AY118509-1|AAM49878.1| 487|Drosophila melanogaster LD13435p pro... 28 4.0
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA... 28 4.0
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB... 28 4.0
BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p pro... 27 9.3
BT011057-1|AAR31128.1| 996|Drosophila melanogaster RE40649p pro... 27 9.3
BT010094-1|AAQ22563.1| 861|Drosophila melanogaster GH26833p pro... 27 9.3
BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p pro... 27 9.3
BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p pro... 27 9.3
AE014297-3844|AAF56499.2| 883|Drosophila melanogaster CG31094-P... 27 9.3
AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-P... 27 9.3
AE014297-3842|AAO41604.1| 826|Drosophila melanogaster CG31092-P... 27 9.3
AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-P... 27 9.3
>AY094792-1|AAM11145.1| 486|Drosophila melanogaster LD20987p
protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.081
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -3
Query: 303 SCSFGSRGCRFGGQRQLLSGQAQLVSGQAQLISGQAQLLSGQ 178
SCSF GCRF G RQ+L +A L S A +S L S Q
Sbjct: 272 SCSFKEAGCRFKGPRQML--EAHLESNAAAHLSLMVALSSRQ 311
>AF119794-1|AAD34346.1| 486|Drosophila melanogaster
TNF-receptor-associated factor 1 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.081
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -3
Query: 303 SCSFGSRGCRFGGQRQLLSGQAQLVSGQAQLISGQAQLLSGQ 178
SCSF GCRF G RQ+L +A L S A +S L S Q
Sbjct: 272 SCSFKEAGCRFKGPRQML--EAHLESNAAAHLSLMVALSSRQ 311
>AF111422-1|AAG21891.1| 412|Drosophila melanogaster TRAF1 protein.
Length = 412
Score = 33.5 bits (73), Expect = 0.081
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -3
Query: 303 SCSFGSRGCRFGGQRQLLSGQAQLVSGQAQLISGQAQLLSGQ 178
SCSF GCRF G RQ+L +A L S A +S L S Q
Sbjct: 198 SCSFKEAGCRFKGPRQML--EAHLESNAAAHLSLMVALSSRQ 237
>AF079837-1|AAD47894.1| 412|Drosophila melanogaster TRAF1 protein.
Length = 412
Score = 33.5 bits (73), Expect = 0.081
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -3
Query: 303 SCSFGSRGCRFGGQRQLLSGQAQLVSGQAQLISGQAQLLSGQ 178
SCSF GCRF G RQ+L +A L S A +S L S Q
Sbjct: 198 SCSFKEAGCRFKGPRQML--EAHLESNAAAHLSLMVALSSRQ 237
>AE014134-724|AAN10343.1| 412|Drosophila melanogaster CG3048-PB,
isoform B protein.
Length = 412
Score = 33.5 bits (73), Expect = 0.081
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -3
Query: 303 SCSFGSRGCRFGGQRQLLSGQAQLVSGQAQLISGQAQLLSGQ 178
SCSF GCRF G RQ+L +A L S A +S L S Q
Sbjct: 198 SCSFKEAGCRFKGPRQML--EAHLESNAAAHLSLMVALSSRQ 237
>AE014134-723|AAF51024.1| 486|Drosophila melanogaster CG3048-PA,
isoform A protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.081
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -3
Query: 303 SCSFGSRGCRFGGQRQLLSGQAQLVSGQAQLISGQAQLLSGQ 178
SCSF GCRF G RQ+L +A L S A +S L S Q
Sbjct: 272 SCSFKEAGCRFKGPRQML--EAHLESNAAAHLSLMVALSSRQ 311
>BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p
protein.
Length = 481
Score = 30.7 bits (66), Expect = 0.57
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 1.00
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ T + PE + + PE + + PE S + PE S
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEES 175
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
Q + + PE + + PE + + PE + + PE S
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEES 168
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ + + PE + + PE S + PE S + PE +
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEET 203
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + + + PE S + PE + + PE S + P+ +
Sbjct: 183 TSAPEESSSAPEESSSAPEETTSAPEESSSAPDQT 217
>BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p
protein.
Length = 481
Score = 30.7 bits (66), Expect = 0.57
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 1.00
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ T + PE + + PE + + PE S + PE S
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEES 175
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
Q + + PE + + PE + + PE + + PE S
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEES 168
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ + + PE + + PE S + PE S + PE +
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEET 203
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + + + PE S + PE + + PE S + P+ +
Sbjct: 183 TSAPEESSSAPEESSSAPEETTSAPEESSSAPDQT 217
>AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA
protein.
Length = 481
Score = 30.7 bits (66), Expect = 0.57
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 1.00
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ T + PE + + PE + + PE S + PE S
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEES 175
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
Q + + PE + + PE + + PE + + PE S
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEES 168
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 164 QNTGTCPESSCACPEISCACPETSCACPESS 256
+ + + PE + + PE S + PE S + PE +
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEET 203
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
T + + + PE S + PE + + PE S + P+ +
Sbjct: 183 TSAPEESSSAPEESSSAPEETTSAPEESSSAPDQT 217
>AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA
protein.
Length = 1127
Score = 29.9 bits (64), Expect = 1.00
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 256
TC ++++ T + + ++ CAC SC ESS
Sbjct: 247 TCSTRSSSTTSTNEASASDVKCACDAPSCRFMESS 281
>BT016123-1|AAV37008.1| 591|Drosophila melanogaster LD01328p
protein.
Length = 591
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 355 FRVPXFSGCWF--NRLRFLQLQFWEQGLQVWGXE 260
+R P +G F NR FL+L ++ GL VWG E
Sbjct: 314 YRSPTHAGGLFAINREYFLELGAYDPGLLVWGGE 347
>AY268068-1|AAQ56704.1| 591|Drosophila melanogaster
UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
protein.
Length = 591
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 355 FRVPXFSGCWF--NRLRFLQLQFWEQGLQVWGXE 260
+R P +G F NR FL+L ++ GL VWG E
Sbjct: 314 YRSPTHAGGLFAINREYFLELGAYDPGLLVWGGE 347
>AY058660-1|AAL13889.1| 486|Drosophila melanogaster LD36616p
protein.
Length = 486
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 355 FRVPXFSGCWF--NRLRFLQLQFWEQGLQVWGXE 260
+R P +G F NR FL+L ++ GL VWG E
Sbjct: 209 YRSPTHAGGLFAINREYFLELGAYDPGLLVWGGE 242
>AF493067-1|AAM62412.1| 591|Drosophila melanogaster
UDP-N-acetylgalactosamine:
polypeptideN-acetylgalactosaminyltransferase 2 protein.
Length = 591
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 355 FRVPXFSGCWF--NRLRFLQLQFWEQGLQVWGXE 260
+R P +G F NR FL+L ++ GL VWG E
Sbjct: 314 YRSPTHAGGLFAINREYFLELGAYDPGLLVWGGE 347
>AE014298-2730|AAN09470.1| 591|Drosophila melanogaster CG6394-PB,
isoform B protein.
Length = 591
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 355 FRVPXFSGCWF--NRLRFLQLQFWEQGLQVWGXE 260
+R P +G F NR FL+L ++ GL VWG E
Sbjct: 314 YRSPTHAGGLFAINREYFLELGAYDPGLLVWGGE 347
>AE014298-2729|AAF48851.1| 591|Drosophila melanogaster CG6394-PA,
isoform A protein.
Length = 591
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 355 FRVPXFSGCWF--NRLRFLQLQFWEQGLQVWGXE 260
+R P +G F NR FL+L ++ GL VWG E
Sbjct: 314 YRSPTHAGGLFAINREYFLELGAYDPGLLVWGGE 347
>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
protein.
Length = 2146
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPE 229
T + N G C ES A P+ C CPE
Sbjct: 2035 TDLCSNGGRCVESCGAKPDYYCECPE 2060
>AY118509-1|AAM49878.1| 487|Drosophila melanogaster LD13435p
protein.
Length = 487
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPE 229
T + N G C ES A P+ C CPE
Sbjct: 376 TDLCSNGGRCVESCGAKPDYYCECPE 401
>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
isoform A protein.
Length = 2146
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPE 229
T + N G C ES A P+ C CPE
Sbjct: 2035 TDLCSNGGRCVESCGAKPDYYCECPE 2060
>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
isoform B protein.
Length = 2189
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 152 TCVSQNTGTCPESSCACPEISCACPE 229
T + N G C ES A P+ C CPE
Sbjct: 2078 TDLCSNGGRCVESCGAKPDYYCECPE 2103
>BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p
protein.
Length = 1037
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 825 CQSVN-GHCSHLCLPAPRINERSPRISCACP 854
>BT011057-1|AAR31128.1| 996|Drosophila melanogaster RE40649p
protein.
Length = 996
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 784 CQSVN-GHCSHLCLPAPRINERSPRISCACP 813
>BT010094-1|AAQ22563.1| 861|Drosophila melanogaster GH26833p
protein.
Length = 861
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 674 CQSVN-GHCSHLCLPAPRINERSPRISCACP 703
>BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p
protein.
Length = 1064
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 877 CQSVN-GHCSHLCLPAPRINERSPRISCACP 906
>BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p
protein.
Length = 739
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 586 CQSVN-GHCSHLCLPAPRINERSPRISCACP 615
>AE014297-3844|AAF56499.2| 883|Drosophila melanogaster CG31094-PA,
isoform A protein.
Length = 883
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 677 CQSVN-GHCSHLCLPAPRINERSPRISCACP 706
>AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-PB,
isoform B protein.
Length = 1031
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 825 CQSVN-GHCSHLCLPAPRINERSPRISCACP 854
>AE014297-3842|AAO41604.1| 826|Drosophila melanogaster CG31092-PB,
isoform B protein.
Length = 826
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 674 CQSVN-GHCSHLCLPAPRINERSPRISCACP 703
>AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-PA,
isoform A protein.
Length = 1069
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 155 CVSQNTGTCPESSCACPEISCACPETSCACP 247
C S N G C P I+ P SCACP
Sbjct: 917 CQSVN-GHCSHLCLPAPRINERSPRISCACP 946
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,166,355
Number of Sequences: 53049
Number of extensions: 113353
Number of successful extensions: 847
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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