Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_F23
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 204 7e-54
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 62 5e-11
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 62 9e-11
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 59 6e-10
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 56 3e-09
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 50 2e-07
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 49 7e-07
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 48 2e-06
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 44 1e-05
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 31 0.14
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 28 1.3
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 26 5.4
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 5.4
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 25 9.5
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 204 bits (499), Expect = 7e-54
Identities = 98/153 (64%), Positives = 123/153 (80%)
Frame = +3
Query: 192 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKG 371
R YAKD++FG D RA +L GVD LA AV+VT+GPKGRNV+++Q +GSPKITKDGVTVA+
Sbjct: 31 RTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARS 90
Query: 372 VELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRG 551
V LKDKF+N+GA+LVQ+VA+ TNE AGDGTTTATVL RAI E ++ G NP+++RRG
Sbjct: 91 VSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRG 150
Query: 552 VMLAVDAVKEKLKGMSKPVTTPEEIAQVATISA 650
+ LAVD V E L+ + +TT EEI+QVATISA
Sbjct: 151 IQLAVDNVVEFLQANKRDITTSEEISQVATISA 183
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 62.5 bits (145), Expect = 5e-11
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Frame = +3
Query: 219 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 398
G D + +A+ V ++GP+G + IL G +T DG T+ +E++ +
Sbjct: 32 GIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQI-- 89
Query: 399 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 578
AKL+ ++ + ++E GDGTT VLA A+ ++ I KG +PI I G A
Sbjct: 90 --AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAV 147
Query: 579 EKLKGMSKPVT-TPE 620
+ L +S V +PE
Sbjct: 148 KHLDAISDVVDFSPE 162
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 61.7 bits (143), Expect = 9e-11
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 219 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQ-SWGSPKITKDGVTVAKGVELKDKFQ 395
G + R G + D V T+GPKG + IL+ S G +T DG T+ K + L
Sbjct: 18 GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIAL----D 73
Query: 396 NIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAV 575
N AK++ N++ ++E GDGTT+ V A + ++ ++ +P I G +A
Sbjct: 74 NAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTA 133
Query: 576 KEKLKGMS 599
+ L+ S
Sbjct: 134 IDALRASS 141
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 58.8 bits (136), Expect = 6e-10
Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Frame = +3
Query: 225 DVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIG 404
+VR + +ADA+ ++GPKG + +++ G +T DG T+ K + + +
Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSV----LHPA 74
Query: 405 AKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEI----RRGVMLAVDA 572
AK++ +++ + EAGDGTT+ +LA ++ + + KG +P I +R VD
Sbjct: 75 AKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDC 134
Query: 573 VKEKLKGMSKPVTTPEEIAQVATIS 647
+KE ++ ++ E + + AT S
Sbjct: 135 MKE--NALAIELSDRESLLRAATTS 157
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 56.4 bits (130), Expect = 3e-09
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +3
Query: 219 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 398
G DVR + +A+ V ++GP G + +L G +T DG T+ + L D
Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATI---LSLLDVEHP 75
Query: 399 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV-DAV 575
G LV+ +A ++E GDGTT+ ++A + + E + +P I G LA+ +AV
Sbjct: 76 AGKVLVE-LAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 576 K 578
K
Sbjct: 135 K 135
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 50.4 bits (115), Expect = 2e-07
Identities = 30/108 (27%), Positives = 50/108 (46%)
Frame = +3
Query: 267 DAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEE 446
D + T+GP G + ++ G I+ DG T+ K +++ AK + ++A + E
Sbjct: 38 DTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHP----AAKTLVDIARAQDAE 93
Query: 447 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 590
GDGTT+ V A + +E + G + I RG A K+K
Sbjct: 94 VGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIK 141
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 48.8 bits (111), Expect = 7e-07
Identities = 30/126 (23%), Positives = 57/126 (45%)
Frame = +3
Query: 243 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 422
+Q +AD + +GP+ +L GS +T DG + + +E+ AK +
Sbjct: 25 IQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP----AAKSMIE 80
Query: 423 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 602
+A +EE GDGTT+ +LA I + + +P+ + R A++ + ++
Sbjct: 81 LARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITL 140
Query: 603 PVTTPE 620
PV +
Sbjct: 141 PVNVDD 146
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 47.6 bits (108), Expect = 2e-06
Identities = 30/101 (29%), Positives = 48/101 (47%)
Frame = +3
Query: 261 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 440
L D + +GP G +L G+ K+TKDG + +++ QN A + A +
Sbjct: 28 LQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQI----QNPTASCIAKAATAQD 83
Query: 441 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLA 563
+ GDGTT+ +L + K+ I +G +P I G LA
Sbjct: 84 DATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLA 124
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 44.4 bits (100), Expect = 1e-05
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +3
Query: 261 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 440
L++ ++GP G+N I+ +T D T+ + +E+ AKLV +
Sbjct: 38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHP----AAKLVVDATQQQE 93
Query: 441 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 590
E GD V + + I G P+EI +G +A+ E L+
Sbjct: 94 NELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLE 143
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 31.1 bits (67), Expect = 0.14
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 300 RNVILEQSWGSPKITKDGVTVAK-GVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATV 476
R VI ++ S +T G T G+ELKD+F+ +G K++ T + T +
Sbjct: 542 RKVIKQERPDSIYVTFGGQTALNVGIELKDEFEQLGVKVL-----GTPIDTIITTEDREL 596
Query: 477 LARAIAKEGFEKISKGANPIEIRRGVMLAVD 569
ARA+ E EK +K A+ I + ++ D
Sbjct: 597 FARAM-DEINEKCAKSASASSIEEAIKVSKD 626
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 320 LFQNNVSTFWTHCNGYGIS*DVNALQHESSYISAKPHIFGI 198
++ N +S T +G+GI +++ + E SAK H+FGI
Sbjct: 225 IYPNTLSVLRTRASGFGIKIELDNITPELITKSAK-HVFGI 264
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 180 YQLSRFYAKDVRFGADVRALMLQGVDILADAV 275
Y+L+ F+ R+ V LQGV + AD V
Sbjct: 152 YRLTNFFQNHRRYAKSVDEKQLQGVALTADEV 183
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 25.8 bits (54), Expect = 5.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = -2
Query: 415 TNLAPMFWNLSLSSTPLATVTPSFVIFGD--PQDCSR-----ITF-LPFGPIVTATASAR 260
T L P F NL SS+ T F+ D ++ SR I F + + P+V+
Sbjct: 129 TLLPPTFHNLIPSSSSYETAVAEFLHMEDLLQENVSRELECQICFGMLYDPVVSPCGHT- 187
Query: 259 MSTPCSMRALTSAP 218
PC M+ALT +P
Sbjct: 188 FCGPCLMQALTQSP 201
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 364 ATVTPSFVIFGDPQDCSRITFLPFGPIVTATASARMSTPCSMRALTSAPNLTSL 203
A+V P P ++ L P+ A SAR S+ S ++ + P+L +L
Sbjct: 539 ASVRPITAAVFAPTKTKQLLTLSGDPVYLAAISARRSSVISNASIETGPSLRNL 592
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,329,337
Number of Sequences: 5004
Number of extensions: 43254
Number of successful extensions: 145
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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