Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_F19
(465 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 154 4e-38
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 154 4e-38
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 154 4e-38
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 51 5e-07
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 1.4
04_04_1074 + 30628192-30628456,30628924-30629144 27 5.6
02_05_0881 + 32473208-32473575,32473742-32473826,32473991-324740... 27 5.6
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 27 7.4
11_01_0746 + 6294277-6294687 27 7.4
03_05_0291 - 22837412-22838128 27 7.4
03_03_0140 + 14771293-14771821,14772343-14772455,14772723-147728... 27 7.4
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 27 7.4
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 27 9.8
11_06_0434 - 23512921-23513529 27 9.8
06_01_0041 + 403634-403817,404154-404332,404431-404536,404620-40... 27 9.8
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 27 9.8
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 27 9.8
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 154 bits (373), Expect = 4e-38
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +1
Query: 157 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 336
K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++RQRKP+ +DG ++YFEDNA
Sbjct: 43 KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNA 102
Query: 337 GVIXNNXGEMKGSAITGPVAKECADLWPR 423
GVI N GEMKGSAITGP+ KECADLWPR
Sbjct: 103 GVIVNPKGEMKGSAITGPIGKECADLWPR 131
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 93 LGAVINCADNTGAKNLYVIAVQG 161
+ A +NCADNTGAKNLY+I+V+G
Sbjct: 22 VAATVNCADNTGAKNLYIISVKG 44
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 154 bits (373), Expect = 4e-38
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +1
Query: 157 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 336
K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++RQRKP+ +DG ++YFEDNA
Sbjct: 43 KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNA 102
Query: 337 GVIXNNXGEMKGSAITGPVAKECADLWPR 423
GVI N GEMKGSAITGP+ KECADLWPR
Sbjct: 103 GVIVNPKGEMKGSAITGPIGKECADLWPR 131
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 93 LGAVINCADNTGAKNLYVIAVQG 161
+ A +NCADNTGAKNLY+I+V+G
Sbjct: 22 VAATVNCADNTGAKNLYIISVKG 44
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 154 bits (373), Expect = 4e-38
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +1
Query: 157 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 336
K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++RQRKP+ +DG ++YFEDNA
Sbjct: 60 KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNA 119
Query: 337 GVIXNNXGEMKGSAITGPVAKECADLWPR 423
GVI N GEMKGSAITGP+ KECADLWPR
Sbjct: 120 GVIVNPKGEMKGSAITGPIGKECADLWPR 148
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 93 LGAVINCADNTGAKNLYVIAVQG 161
+ A +NCADNTGAKNLY+I+V+G
Sbjct: 39 VAATVNCADNTGAKNLYIISVKG 61
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 202 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKG 372
GD I+ +VK+ +P + K V+ VV+R DG I F+DNA V+ NN GE+ G
Sbjct: 84 GDTIIGSVKEAQPRGKVKKGDVVYGVVVRAAMKRGRNDGSEIQFDDNAIVLVNNKGELIG 143
Query: 373 SAITGPVAKE 402
+ + GPV E
Sbjct: 144 TRVFGPVPHE 153
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 342 DTRIVLKVYKXSITXXERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 205
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>04_04_1074 + 30628192-30628456,30628924-30629144
Length = 161
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 62 AKFRISLGLPAGSSNQLRRQHRGKESVCDRCP 157
A F S PA + +LRRQH + VCD P
Sbjct: 2 AFFAGSSKAPASARLKLRRQHDQQREVCDALP 33
>02_05_0881 +
32473208-32473575,32473742-32473826,32473991-32474053,
32474199-32474241,32474737-32474796,32475001-32475301,
32475554-32475668,32476168-32476272,32476338-32476517
Length = 439
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 45 WWFPRERNSVSPWVSQLGAVINCADNTGAKNLYVIAVQGYQRSPEQ---TAGGRFRGHDC 215
WW+PR R S W+ + I C D L+ + VQ P TA RG+
Sbjct: 295 WWWPRSRGSGGGWIC-IVRFIGCFDELN-HYLFFVNVQMANTLPYHLLITAIRVVRGNPY 352
Query: 216 GHS 224
G+S
Sbjct: 353 GYS 355
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 128 PCVVGAVDYCSQLGDPGR-YGISLPREPPRPLL 33
PC G + C + G GR YG S+P P PLL
Sbjct: 238 PCYQGCYEGC-RCGGCGRVYGYSVPSARPPPLL 269
>11_01_0746 + 6294277-6294687
Length = 136
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 90 QLGAVINCADNTGAKNLYVIAVQGYQRSPEQ----TAGGRFRGHDCGHSQKG*T*TPEKG 257
+LGA N DN G + + V G + + + T GG G + S+ G + P G
Sbjct: 22 ELGAGSNRRDNRGGRIRLLDDVGGRRATTTKGAAATLGGNSTGEEAARSRSGASSRPTGG 81
Query: 258 NAGSG 272
G G
Sbjct: 82 GVGKG 86
>03_05_0291 - 22837412-22838128
Length = 238
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 437 AFEAIRGHRSAHSLATGPVMAEPFI--SPLLLXMTPALSS 324
+++A+ GH+++H T P MA + P +PA SS
Sbjct: 100 SYQALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPAASS 139
>03_03_0140 +
14771293-14771821,14772343-14772455,14772723-14772830,
14772931-14772973,14773454-14773593,14774216-14774446
Length = 387
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -2
Query: 407 AHSLATGPVMAEPFISPLLLXMTPALSSKYINXPSRXXNGFRCLMTTA 264
AH ATGP ++ +TP LSS + + P+R + R L+ A
Sbjct: 76 AHVFATGPGGRPDLARSAVMRVTPGLSS-FADEPARAGDSLRPLIDFA 122
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 182 LFRRPLIALDSDHIQILCPCVVGAVDYCSQLGD 84
LFRR L+S H Q++ P + D+ S G+
Sbjct: 361 LFRRIASCLNSSHFQLIKPFIGDPTDHISSSGE 393
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 217 PQSCPRNRPPAVCSGDL 167
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 217 PQSCPRNRPPAVCSGDL 167
P+SCP + PP V S DL
Sbjct: 434 PESCPSSLPPFVVSSDL 450
>11_06_0434 - 23512921-23513529
Length = 202
Score = 26.6 bits (56), Expect = 9.8
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 336
KA+ + AG GD VA +GK L ++ + A++ + KP+ + F +DN
Sbjct: 18 KAVVYEVEAAATAGEGDTPVA---EGKVRLSQESVDAILAEETKPYPNME-YFRSLKDNP 73
Query: 337 GV 342
V
Sbjct: 74 AV 75
>06_01_0041 +
403634-403817,404154-404332,404431-404536,404620-404936,
405231-405605,406199-406283,406570-408066,408575-408738
Length = 968
Score = 26.6 bits (56), Expect = 9.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = -2
Query: 203 PEPAAGSLFRR--PLIALDSDHIQILCPCVVGAVDY--CSQLGDPGRYGISLPREP---P 45
PE A L R L+ DS+H+Q+L P +G+ + Q Y + R P P
Sbjct: 740 PEKAVDDLNYRLQSLVPGDSEHVQVLGPDALGSHSHERRYQAESQNLYHLLQGRPPALAP 799
Query: 44 RPLLD 30
RP++D
Sbjct: 800 RPMMD 804
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 217 PQSCPRNRPPAVCSGDL 167
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 217 PQSCPRNRPPAVCSGDL 167
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,435,833
Number of Sequences: 37544
Number of extensions: 287528
Number of successful extensions: 731
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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