Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_F11
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0230 - 1679165-1681108                                           29   2.3  
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157...    29   3.1  
06_01_0127 - 977667-978719,978875-979051                               29   4.1  
12_02_0191 + 15178717-15179045,15179147-15179546,15179624-151796...    28   5.4  
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936...    28   7.1  
11_06_0187 - 21029511-21029857,21031444-21031739,21032270-210323...    27   9.4  

>07_01_0230 - 1679165-1681108
          Length = 647

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -2

Query: 256 SPVPLIHVFCQYEMQVRSNRRPASN-LHQSPEILM--VQRPWPDPSESSSFNFK 104
           SP+  ++ F  + ++V   RRP +N  H SP IL+  V   W   S +S+ + +
Sbjct: 506 SPLTDVYAFAIFVLEVTCGRRPINNYTHDSPTILVDWVVEHWQKGSLTSTLDVR 559


>04_04_0411 -
           25014511-25015015,25015098-25015169,25015700-25015734,
           25015805-25015873,25015993-25016044,25016444-25016526,
           25016625-25016726,25017150-25017884,25017962-25018012,
           25018792-25018983,25019066-25019216,25020012-25020193,
           25020329-25020532,25020752-25020859
          Length = 846

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 160 EFQDSGEDWTPDADSNEPASRTGR 231
           EF D G D  PDA S+ P  R GR
Sbjct: 639 EFIDEGRDNNPDASSDMPHGRRGR 662


>06_01_0127 - 977667-978719,978875-979051
          Length = 409

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 426 CTKAFPFRKFCLAXIRCKMGWXYCN 500
           C +  P+R+ CLA  +C+ G  Y N
Sbjct: 130 CARLGPYRRGCLANSQCQFGITYAN 154


>12_02_0191 +
           15178717-15179045,15179147-15179546,15179624-15179668,
           15180506-15180571,15181829-15181890,15182161-15182326,
           15183384-15183507,15184177-15184283,15184395-15184505
          Length = 469

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +2

Query: 344 GNLMXKKDLMMRKTDPMETNLIQVNRKMYQSISIQ 448
           G+L   KD+ +  +DP + N + + RK ++SI ++
Sbjct: 15  GDLKFFKDITVTTSDPSKKNAVVMGRKTWESIPLK 49


>04_04_0640 -
           26891552-26891725,26891814-26892326,26892698-26893644,
           26893778-26894114,26894413-26894462,26895020-26895248
          Length = 749

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 199 RRPASNLHQSPEILMVQRPWPDPSESSS 116
           RRPA +   +  +L+  RP+P PS +SS
Sbjct: 16  RRPAVSAASASRLLLGHRPFPAPSPASS 43


>11_06_0187 -
           21029511-21029857,21031444-21031739,21032270-21032345,
           21032714-21032836,21033200-21033228,21033823-21034328
          Length = 458

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 508 LDELNLWKIDGXALLQKFIPMESNGRVLHKCTCVYSGWN 624
           LD ++L  +   +   K   + ++   LHK  CV  GWN
Sbjct: 245 LDSIDLHSLLNHSYYAKSAELRADHLGLHKALCVLMGWN 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,590,805
Number of Sequences: 37544
Number of extensions: 286058
Number of successful extensions: 827
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)