Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_F03
(644 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054868-1|AAH54868.1| 178|Homo sapiens nucleophosmin/nucleopla... 41 0.003
BC041067-1|AAH41067.1| 178|Homo sapiens nucleophosmin/nucleopla... 41 0.003
AY049737-1|AAL12172.1| 178|Homo sapiens nucleophosmin/nucleopla... 41 0.003
AF081280-1|AAC31609.1| 178|Homo sapiens nucleoplasmin-3 protein. 41 0.003
AF079325-1|AAD51496.1| 178|Homo sapiens nucleophosmin/nucleopla... 37 0.053
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 31 2.7
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 31 2.7
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 31 2.7
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 31 2.7
U04953-1|AAA80153.1| 1262|Homo sapiens isoleucyl-tRNA synthetase... 31 4.6
D28473-1|BAA05835.1| 1266|Homo sapiens isoleucyl-tRNA synthetase... 31 4.6
BX538109-1|CAD98022.1| 1152|Homo sapiens hypothetical protein pr... 31 4.6
BX537417-1|CAD97659.1| 1242|Homo sapiens hypothetical protein pr... 31 4.6
BC065552-1|AAH65552.1| 1055|Homo sapiens IARS protein protein. 31 4.6
AL136097-7|CAI16202.1| 1266|Homo sapiens isoleucine-tRNA synthet... 31 4.6
AL136097-6|CAI16201.1| 330|Homo sapiens isoleucine-tRNA synthet... 31 4.6
AK057442-1|BAB71488.1| 556|Homo sapiens protein ( Homo sapiens ... 31 4.6
AB209234-1|BAD92471.1| 1279|Homo sapiens Isoleucyl-tRNA syntheta... 31 4.6
>BC054868-1|AAH54868.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin, 3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.003
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 67 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 246
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 247 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFG 366
+ + +PVA LK+ + LD PVTF L G G
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSG 129
>BC041067-1|AAH41067.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin, 3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.003
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 67 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 246
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 247 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFG 366
+ + +PVA LK+ + LD PVTF L G G
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSG 129
>AY049737-1|AAL12172.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin 3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.003
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 67 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 246
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 247 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFG 366
+ + +PVA LK+ + LD PVTF L G G
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSG 129
>AF081280-1|AAC31609.1| 178|Homo sapiens nucleoplasmin-3 protein.
Length = 178
Score = 41.1 bits (92), Expect = 0.003
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 67 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 246
+ D FF+G LS +S T+ E + + + L + L AK DE NV++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--AEHVLALTMLCLTEGAK-DECNVVEVVARN 88
Query: 247 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFG 366
+ + +PVA LK+ + LD PVTF L G G
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSG 129
>AF079325-1|AAD51496.1| 178|Homo sapiens
nucleophosmin/nucleoplasmin3 protein.
Length = 178
Score = 37.1 bits (82), Expect = 0.053
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 67 IMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMS 246
+ D FF+G LS +S T+ E + + + L + L AK DE V++V A +
Sbjct: 32 VTMDSFFFGCELSGHTRSFTFKVEEEDD--ADDVLALTMLCLTEGAK-DECIVVKVVARN 88
Query: 247 LQ-EAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFG 366
+ + +PVA LK+ + LD PVTF L G G
Sbjct: 89 HDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSG 129
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +1
Query: 61 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 240
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 119 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 177
Query: 241 MSLQEAVKLPVAVLKVGESRHVR 309
L+ LP VLK + HVR
Sbjct: 178 -GLRYLASLPSHVLK---NDHVR 196
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +1
Query: 61 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 240
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 2 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 60
Query: 241 MSLQEAVKLPVAVLKVGESRHVR 309
L+ LP VLK + HVR
Sbjct: 61 -GLRYLASLPSHVLK---NDHVR 79
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +1
Query: 61 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 240
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 119 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 177
Query: 241 MSLQEAVKLPVAVLKVGESRHVR 309
L+ LP VLK + HVR
Sbjct: 178 -GLRYLASLPSHVLK---NDHVR 196
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +1
Query: 61 EIIMTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEA 240
E++ +D VT SSS +E + YP N + L GPDA E N + +++
Sbjct: 80 EVLWSDSSITSVTKSSSEVTEFISKLCQL-YPEENLEKLIPCLAGPDAFYVERNHVDLDS 138
Query: 241 MSLQEAVKLPVAVLKVGESRHVR 309
L+ LP VLK + HVR
Sbjct: 139 -GLRYLASLPSHVLK---NDHVR 157
>U04953-1|AAA80153.1| 1262|Homo sapiens isoleucyl-tRNA synthetase
protein.
Length = 1262
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 176 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 230
>D28473-1|BAA05835.1| 1266|Homo sapiens isoleucyl-tRNA synthetase
protein.
Length = 1266
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 180 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 234
>BX538109-1|CAD98022.1| 1152|Homo sapiens hypothetical protein
protein.
Length = 1152
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 66 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 120
>BX537417-1|CAD97659.1| 1242|Homo sapiens hypothetical protein
protein.
Length = 1242
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 176 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 230
>BC065552-1|AAH65552.1| 1055|Homo sapiens IARS protein protein.
Length = 1055
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 21 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 75
>AL136097-7|CAI16202.1| 1266|Homo sapiens isoleucine-tRNA synthetase
protein.
Length = 1266
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 180 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 234
>AL136097-6|CAI16201.1| 330|Homo sapiens isoleucine-tRNA synthetase
protein.
Length = 330
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 176 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 230
>AK057442-1|BAB71488.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ32880 fis, clone TESTI2004122. ).
Length = 556
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 466 EMILSSRMKIMKKVNPRAKKRKCRIMPKAKLHRPRRMPRNEQTAWRP 606
E +LS K+ ++ PR K R R M H P+R PR E T +P
Sbjct: 497 EQLLSEAGKVDREGTPR-KPRSHRSMGVRMEHSPQRPPRTEPTGSQP 542
>AB209234-1|BAD92471.1| 1279|Homo sapiens Isoleucyl-tRNA synthetase,
cytoplasmic variant protein.
Length = 1279
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 232 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGFGASTLNWTPSPWVL 405
V+ M A P++ ES D++ P VTF L + S + WT +PW L
Sbjct: 193 VKVMPFSTACNTPLSNF---ESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTL 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,006,630
Number of Sequences: 237096
Number of extensions: 1667401
Number of successful extensions: 3870
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3838
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -