Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_F02
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 199 2e-51
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 199 2e-51
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 199 2e-51
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 115 3e-26
07_03_1357 - 25982861-25983068,25983354-25983361 50 2e-06
07_03_1358 - 25984897-25984997,25985623-25985650 37 0.014
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 2.9
03_06_0069 - 31449319-31450368 28 5.0
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 5.0
08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931 27 8.8
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 8.8
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 27 8.8
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 199 bits (485), Expect = 2e-51
Identities = 96/151 (63%), Positives = 117/151 (77%)
Frame = +3
Query: 153 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 332
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 19 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 78
Query: 333 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXXXXXXXXXXXV 512
LRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKS V
Sbjct: 79 LRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRV 138
Query: 513 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 605
+Q+VNIPSF+VR++S KHIDFSL SPFGGG
Sbjct: 139 GRQIVNIPSFMVRVESEKHIDFSLTSPFGGG 169
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 199 bits (485), Expect = 2e-51
Identities = 96/151 (63%), Positives = 117/151 (77%)
Frame = +3
Query: 153 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 332
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 42 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 101
Query: 333 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXXXXXXXXXXXV 512
LRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKS V
Sbjct: 102 LRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRV 161
Query: 513 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 605
+Q+VNIPSF+VR++S KHIDFSL SPFGGG
Sbjct: 162 GRQIVNIPSFMVRVESEKHIDFSLTSPFGGG 192
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 199 bits (485), Expect = 2e-51
Identities = 96/151 (63%), Positives = 117/151 (77%)
Frame = +3
Query: 153 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 332
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 235 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 294
Query: 333 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXXXXXXXXXXXV 512
LRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKS V
Sbjct: 295 LRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRV 354
Query: 513 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 605
+Q+VNIPSF+VR++S KHIDFSL SPFGGG
Sbjct: 355 GRQIVNIPSFMVRVESEKHIDFSLTSPFGGG 385
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 115 bits (276), Expect = 3e-26
Identities = 61/105 (58%), Positives = 75/105 (71%)
Frame = +3
Query: 153 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 332
RP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P+R+FEG AL
Sbjct: 19 RPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRRIFEGEAL 67
Query: 333 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 467
LR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KS
Sbjct: 68 LRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKS 112
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 510 VRKQVVNIPSFIVRLDSGKHIDFSLKSPFGG 602
V +Q+VNIPSFIVRL+S KHI FSL SP GG
Sbjct: 4 VGRQLVNIPSFIVRLESEKHIAFSLTSPLGG 34
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 153 RPFEKARLDQELKIIGEYG 209
RP+EK RLD ELK++GEYG
Sbjct: 19 RPYEKERLDAELKLVGEYG 37
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 422 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 550
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 477 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 346
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 180 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 302
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931
Length = 461
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 149 EVSRTSLKIP-TVLCCSPSWRARTHCSPIRIRKEVMNGG 36
E S T+ K+ V CSP RA+ C +++ KEV+ G
Sbjct: 265 EKSGTACKVEYQVEECSPENRAKNECIDVKVTKEVIPCG 303
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 159 FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR----ELLTLE 293
FE A+ ++ KII E R+ ++ +KY LA A ELL L+
Sbjct: 394 FEMAKQEESKKIISEEHQRSNEQITDLKYKLANCMNALESKNLELLNLQ 442
>07_03_0696 -
20754773-20754821,20754930-20755028,20755107-20755226,
20755317-20755402,20756013-20756109,20756181-20756268,
20756358-20756454,20756797-20756892,20757029-20757125,
20757571-20757689,20758559-20758616,20758751-20758857
Length = 370
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 346 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 432
FV +W + + M LV RL TSW+VVC
Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,535,329
Number of Sequences: 37544
Number of extensions: 331666
Number of successful extensions: 785
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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