BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_F01
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X57958-1|CAA41026.1| 253|Homo sapiens ribosomal protein L7 prot... 136 5e-32
X57959-1|CAA41027.1| 248|Homo sapiens ribosomal protein L7 prot... 136 6e-32
X52967-1|CAA37139.1| 248|Homo sapiens ribosomal protein L7 prot... 136 6e-32
L16558-1|AAA03081.1| 248|Homo sapiens ribosomal protein L7 prot... 136 6e-32
BC106056-1|AAI06057.1| 318|Homo sapiens RPL7 protein protein. 136 6e-32
BC087837-1|AAH87837.1| 248|Homo sapiens ribosomal protein L7 pr... 136 6e-32
BC071895-1|AAH71895.1| 248|Homo sapiens ribosomal protein L7 pr... 136 6e-32
BC071894-1|AAH71894.1| 248|Homo sapiens ribosomal protein L7 pr... 136 6e-32
BC071671-1|AAH71671.1| 248|Homo sapiens ribosomal protein L7 pr... 136 6e-32
BC009599-1|AAH09599.1| 248|Homo sapiens ribosomal protein L7 pr... 136 6e-32
BC008850-1|AAH08850.1| 248|Homo sapiens ribosomal protein L7 pr... 136 6e-32
BC006095-1|AAH06095.1| 248|Homo sapiens ribosomal protein L7 pr... 136 6e-32
CR456773-1|CAG33054.1| 248|Homo sapiens RPL7 protein. 135 8e-32
AC005058-2|AAD08846.1| 247|Homo sapiens WUGSC:H_RG054D04.1 prot... 135 8e-32
BC073890-1|AAH73890.1| 246|Homo sapiens ribosomal protein L7-li... 69 8e-12
BC058020-1|AAH58020.1| 246|Homo sapiens RPL7L1 protein protein. 69 8e-12
AL035587-3|CAI21486.1| 246|Homo sapiens ribosomal protein L7-li... 69 8e-12
>X57958-1|CAA41026.1| 253|Homo sapiens ribosomal protein L7
protein.
Length = 253
Score = 136 bits (329), Expect = 5e-32
Identities = 70/136 (51%), Positives = 89/136 (65%)
Frame = +1
Query: 124 KGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKEYR 303
+ +E K++PAVPE++ K L+ ++ + I+++A+ Y KEYR
Sbjct: 8 RAEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYR 67
Query: 304 IKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVF 483
R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG F
Sbjct: 68 QMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTF 127
Query: 484 VRLNNATVNMLRIAXP 531
V+LN A++NMLRI P
Sbjct: 128 VKLNKASINMLRIVEP 143
>X57959-1|CAA41027.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>X52967-1|CAA37139.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>L16558-1|AAA03081.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>BC106056-1|AAI06057.1| 318|Homo sapiens RPL7 protein protein.
Length = 318
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 71 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 130
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 131 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 190
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 191 TFVKLNKASINMLRIVEP 208
>BC087837-1|AAH87837.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>BC071895-1|AAH71895.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>BC071894-1|AAH71894.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>BC071671-1|AAH71671.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>BC009599-1|AAH09599.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>BC008850-1|AAH08850.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>BC006095-1|AAH06095.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 136 bits (328), Expect = 6e-32
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
++G E+ KK +PAVPE++ K L+ ++ + I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
YR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI NG
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120
Query: 478 VFVRLNNATVNMLRIAXP 531
FV+LN A++NMLRI P
Sbjct: 121 TFVKLNKASINMLRIVEP 138
>CR456773-1|CAG33054.1| 248|Homo sapiens RPL7 protein.
Length = 248
Score = 135 bits (327), Expect = 8e-32
Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 2/139 (1%)
Frame = +1
Query: 121 VKGKEDSKK-LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXRE-IFKRAEQYVK 294
++G E+ KK +PAVPE++ K L+ ++ K RE I+++A+ Y K
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLR-KARRELIYEKAKHYHK 59
Query: 295 EYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINN 474
EYR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPKVRKVLQL LRQI N
Sbjct: 60 EYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFN 119
Query: 475 GVFVRLNNATVNMLRIAXP 531
G FV+LN A++NMLRI P
Sbjct: 120 GTFVKLNKASINMLRIVEP 138
>AC005058-2|AAD08846.1| 247|Homo sapiens WUGSC:H_RG054D04.1
protein.
Length = 247
Score = 135 bits (327), Expect = 8e-32
Identities = 70/135 (51%), Positives = 88/135 (65%)
Frame = +1
Query: 127 GKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKEYRI 306
G E+ KK+PAVPE++ K L+ ++ + I+++A+ Y +EYR
Sbjct: 3 GVEEKKKVPAVPETLKKKRRNFSELKMKRLRKKFAQKMLRKARRKLIYEKAKHYHREYRQ 62
Query: 307 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFV 486
R EIR+AR AR GNY+VP E KLAFVIRIRGI+ VSPKVRKVLQL LRQI NG FV
Sbjct: 63 MYRTEIRMARMARKAGNYFVPAEPKLAFVIRIRGISGVSPKVRKVLQLLRLRQIYNGTFV 122
Query: 487 RLNNATVNMLRIAXP 531
+LN A+ NMLRI P
Sbjct: 123 KLNKASTNMLRIVEP 137
>BC073890-1|AAH73890.1| 246|Homo sapiens ribosomal protein L7-like
1 protein.
Length = 246
Score = 69.3 bits (162), Expect = 8e-12
Identities = 40/134 (29%), Positives = 69/134 (51%)
Frame = +1
Query: 130 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKEYRIK 309
+++ +K+P VPE++LK + L + K FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 310 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVR 489
+RD++RL R +P + LAFV+RI I+ VS V++ + L++I +GVFV+
Sbjct: 63 KRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVK 122
Query: 490 LNNATVNMLRIAXP 531
+ + MLRI P
Sbjct: 123 VTPQNLKMLRIVEP 136
>BC058020-1|AAH58020.1| 246|Homo sapiens RPL7L1 protein protein.
Length = 246
Score = 69.3 bits (162), Expect = 8e-12
Identities = 40/134 (29%), Positives = 69/134 (51%)
Frame = +1
Query: 130 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKEYRIK 309
+++ +K+P VPE++LK + L + K FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 310 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVR 489
+RD++RL R +P + LAFV+RI I+ VS V++ + L++I +GVFV+
Sbjct: 63 KRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVK 122
Query: 490 LNNATVNMLRIAXP 531
+ + MLRI P
Sbjct: 123 VTPQNLKMLRIVEP 136
>AL035587-3|CAI21486.1| 246|Homo sapiens ribosomal protein L7-like
1 protein.
Length = 246
Score = 69.3 bits (162), Expect = 8e-12
Identities = 40/134 (29%), Positives = 69/134 (51%)
Frame = +1
Query: 130 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKEYRIK 309
+++ +K+P VPE++LK + L + K FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 310 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVR 489
+RD++RL R +P + LAFV+RI I+ VS V++ + L++I +GVFV+
Sbjct: 63 KRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVK 122
Query: 490 LNNATVNMLRIAXP 531
+ + MLRI P
Sbjct: 123 VTPQNLKMLRIVEP 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,073,302
Number of Sequences: 237096
Number of extensions: 1075500
Number of successful extensions: 2072
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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