Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_F01
(533 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 146 2e-35
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 146 2e-35
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 138 4e-33
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 62 5e-10
AF273707-2|AAL35410.1| 1041|Drosophila melanogaster PFTAIRE-inte... 28 9.2
AF145676-1|AAD38651.1| 869|Drosophila melanogaster BcDNA.GH1250... 28 9.2
AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB... 28 9.2
AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA... 28 9.2
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 146 bits (354), Expect = 2e-35
Identities = 77/138 (55%), Positives = 93/138 (67%)
Frame = +1
Query: 118 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
PV K +KKLPAVPES LK + LK+ + +E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
Y E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLF LRQINNG
Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123
Query: 478 VFVRLNNATVNMLRIAXP 531
VF++LN AT+NMLRIA P
Sbjct: 124 VFIKLNKATINMLRIAEP 141
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 146 bits (354), Expect = 2e-35
Identities = 77/138 (55%), Positives = 93/138 (67%)
Frame = +1
Query: 118 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKE 297
PV K +KKLPAVPES LK + LK+ + +E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 298 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNG 477
Y E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLF LRQINNG
Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123
Query: 478 VFVRLNNATVNMLRIAXP 531
VF++LN AT+NMLRIA P
Sbjct: 124 VFIKLNKATINMLRIAEP 141
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 138 bits (334), Expect = 4e-33
Identities = 72/128 (56%), Positives = 87/128 (67%)
Frame = +1
Query: 148 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKXXREIFKRAEQYVKEYRIKERDEIR 327
LPAVPES LK + LK+ + +E RAE+Y EY E+ EI+
Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 60
Query: 328 LARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVRLNNATV 507
L R A+ R +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLF LRQINNGVF++LN AT+
Sbjct: 61 LRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATI 120
Query: 508 NMLRIAXP 531
NMLRIA P
Sbjct: 121 NMLRIAEP 128
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -3
Query: 525 GDT*HIHSSVIQTYKHTIVYLAQXKQLQNFTDLR*NLVDTTDSDDKCQFGFPGNVVVATI 346
GD H+ ++Q +HT+V L Q +QLQN DL +LVDT D+DDK QFG G+V + +
Sbjct: 58 GDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLVDTADTDDKGQFGLGGHVELVAL 117
Query: 345 ACLSG*SDFITF-LDAVFLDVL 283
+ D F LD + L +L
Sbjct: 118 LGQATQLDLALFRLDVLILVLL 139
>AF273707-2|AAL35410.1| 1041|Drosophila melanogaster
PFTAIRE-interacting factor 1B protein.
Length = 1041
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 396 PNPWYQPSFTEGP*SSATVXTAP--NKQWCVCTSE 494
PNP QPSF G +SAT + + C+C SE
Sbjct: 277 PNPRNQPSFGPGDETSATTRSQSIVGQVTCLCASE 311
>AF145676-1|AAD38651.1| 869|Drosophila melanogaster BcDNA.GH12504
protein.
Length = 869
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 396 PNPWYQPSFTEGP*SSATVXTAP--NKQWCVCTSE 494
PNP QPSF G +SAT + + C+C SE
Sbjct: 277 PNPRNQPSFGPGDETSATTRSQSIVGQVTCLCASE 311
>AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB,
isoform B protein.
Length = 1041
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 396 PNPWYQPSFTEGP*SSATVXTAP--NKQWCVCTSE 494
PNP QPSF G +SAT + + C+C SE
Sbjct: 277 PNPRNQPSFGPGDETSATTRSQSIVGQVTCLCASE 311
>AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA,
isoform A protein.
Length = 1041
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 396 PNPWYQPSFTEGP*SSATVXTAP--NKQWCVCTSE 494
PNP QPSF G +SAT + + C+C SE
Sbjct: 277 PNPRNQPSFGPGDETSATTRSQSIVGQVTCLCASE 311
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,468,088
Number of Sequences: 53049
Number of extensions: 327115
Number of successful extensions: 773
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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