Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_E21
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 85 1e-16
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 85 1e-16
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 85 1e-16
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 39 0.011
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 29 6.6
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 29 6.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 6.6
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 29 6.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 6.6
BC069209-1|AAH69209.1| 597|Homo sapiens Unknown (protein for IM... 29 8.8
BC051336-1|AAH51336.1| 597|Homo sapiens RAFTLIN protein protein. 29 8.8
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRRQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 192 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 247
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 248 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 289
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 47/105 (44%), Positives = 62/105 (59%)
Frame = +1
Query: 139 QRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQR 318
Q++VI TST+I + N K+PKH D YF EG+ IF T+KEKY +EQR
Sbjct: 191 QKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQR 246
Query: 319 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 453
K DQK VD ++ I A P L+GYL++ F L + YPH+L F
Sbjct: 247 KIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 38.7 bits (86), Expect = 0.011
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +1
Query: 187 KLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQK 333
K+PKH D YF EG+ IF T+KEKY +EQRK DQK
Sbjct: 146 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQK 190
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 152 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 331
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1737
Query: 332 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 427
+ +S+R + S P + ++ + PS R
Sbjct: 1738 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1768
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 152 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 331
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 714 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 769
Query: 332 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 427
+ +S+R + S P + ++ + PS R
Sbjct: 770 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 800
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 152 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 331
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1737
Query: 332 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 427
+ +S+R + S P + ++ + PS R
Sbjct: 1738 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1768
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 152 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 331
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 205 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 260
Query: 332 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 427
+ +S+R + S P + ++ + PS R
Sbjct: 261 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 291
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 152 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 331
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1730 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1785
Query: 332 R-QSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 427
+ +S+R + S P + ++ + PS R
Sbjct: 1786 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1816
>BC069209-1|AAH69209.1| 597|Homo sapiens Unknown (protein for
IMAGE:5434191) protein.
Length = 597
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 164 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 343
P++HS+ ++ +++ + T+ A + + NA+ SL +K T +SSA R QS
Sbjct: 182 PQYHSSVNSAGSSAPVSTANSTEDARDAK-NARGDHASLENEKPGTGDVSSAPAGRNQSP 240
Query: 344 RL*SKP 361
S P
Sbjct: 241 EPSSGP 246
>BC051336-1|AAH51336.1| 597|Homo sapiens RAFTLIN protein protein.
Length = 597
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 164 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 343
P++HS+ ++ +++ + T+ A + + NA+ SL +K T +SSA R QS
Sbjct: 182 PQYHSSVNSAGSSAPVSTANSTEDARDAK-NARGDHASLENEKPGTGDVSSAPAGRNQSP 240
Query: 344 RL*SKP 361
S P
Sbjct: 241 EPSSGP 246
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,385,642
Number of Sequences: 237096
Number of extensions: 1370174
Number of successful extensions: 4126
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4094
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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