Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_E18
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...   157   6e-39
U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in bl...    29   3.8  
U64859-8|AAC69096.1|  378|Caenorhabditis elegans Prion-like-(q/n...    29   3.8  
AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    29   3.8  
Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF039046-14|AAB94214.1|  388|Caenorhabditis elegans Prion-like-(...    28   5.0  
Z81068-6|CAB02986.1|  725|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF078787-7|AAC26954.2|  518|Caenorhabditis elegans Vegf (vascula...    28   6.6  
AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in...    28   6.6  
AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in ...    28   6.6  
AF016451-4|AAB65996.1|  388|Caenorhabditis elegans Activated in ...    28   6.6  
AF016451-3|AAB66001.1|  388|Caenorhabditis elegans Prion-like-(q...    28   6.6  
U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score =  157 bits (381), Expect = 6e-39
 Identities = 78/122 (63%), Positives = 94/122 (77%)
 Frame = +1

Query: 238 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGL 417
           + +LTN RVRLL+ KG SCYR R++GERKRKSVRGCIVDAN+S L+LVIV+KG  EI GL
Sbjct: 65  QGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGL 124

Query: 418 TDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLV 597
           TD  +PR+LGPKRASKIRKLFNL+K DDV +YV+       +G      +  APKIQRL+
Sbjct: 125 TDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDG----VTKTIAPKIQRLI 180

Query: 598 TP 603
           TP
Sbjct: 181 TP 182



 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/66 (72%), Positives = 55/66 (83%)
 Frame = +3

Query: 45  MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 224
           M+LN +YPATG QK FEV +E KLR+F+EKRM  EV  D LGDEWKGYV+R+ GGNDKQG
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 225 FPMKQG 242
           FPMKQG
Sbjct: 61  FPMKQG 66


>U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 9 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = -1

Query: 273 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPC 136
           Q+T +  CQ  PV     +C C Q  +  +  +      P  ++ C
Sbjct: 43  QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSC 88


>U64859-8|AAC69096.1|  378|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 57
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = -1

Query: 273 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPC 136
           Q+T +  CQ  PV     +C C Q  +  +  +      P  ++ C
Sbjct: 43  QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSC 88


>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 63  YPATGCQKLFEVVDEHK---LRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 221
           Y   G  ++FE+  E K    RIF EK +   +   ++ ++     L++ G NDK+
Sbjct: 6   YLHVGLNRIFEIAKEKKNGKFRIFLEKNVKNVIFLQEIFEKSLFLCLKINGSNDKK 61


>Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical
           protein B0024.10 protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/54 (29%), Positives = 20/54 (37%)
 Frame = +3

Query: 153 EADQLGDEWKGYVLRVAGGNDKQGFPMKQGRPDKQPCSSSDVKGPLMLQTAPRW 314
           +AD +  +W          N       KQ RP  Q  SSS   GP      P+W
Sbjct: 493 KADAMSADWLSLNKTFMPFNSTVNDDRKQKRPQFQSSSSSSHSGPPAKSAMPKW 546


>AF039046-14|AAB94214.1|  388|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 54
           protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = -1

Query: 273 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPC 136
           Q+T +  CQ  PV     +C C Q  +  +  +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQNVQVQTTQCAPACQQSC 89


>Z81068-6|CAB02986.1|  725|Caenorhabditis elegans Hypothetical
           protein F25H5.5 protein.
          Length = 725

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 461 PKSVSCSTLAKKMMYVVMSSNACSQPRKEKKMLNPDIRHLRS 586
           PKS+  S   KK +   MS+    +  + +KM   D  HL++
Sbjct: 105 PKSLLTSETLKKKLQASMSAKRRKEQEQRRKMYEEDNEHLKA 146


>AF078787-7|AAC26954.2|  518|Caenorhabditis elegans Vegf (vascular
           endothelial growthfactor) receptor family protein 2
           protein.
          Length = 518

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 78  CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 221
           C K F+   + ++    E+++  E E  Q  D W G  LR  G  DK+
Sbjct: 272 CVKFFKNYMQEEVVQNIERKLQFEREEQQELDSWTGKSLRAEGVEDKE 319


>AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 8 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 273 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPC 136
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


>AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 7 protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 273 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPC 136
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


>AF016451-4|AAB65996.1|  388|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 6 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 273 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPC 136
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


>AF016451-3|AAB66001.1|  388|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 5
           protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 273 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPC 136
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


>U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical
           protein ZK328.4 protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 400 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSK-EDDVRRYVVKRVLPAKEGKENAKPRHK 573
           Q  P + D N   R  PK   K  K+ +LS  E+D +  V     P+KE KE  K R K
Sbjct: 109 QLYPEMFDSNQKPRQKPKEVKKALKVESLSDYENDDKENVPPCGKPSKE-KEEKKQRTK 166


>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
            protein Y48G1C.5 protein.
          Length = 1161

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 370  LALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 519
            L L   +K  QE+        P  +GPK A +IR L  L  + +   +VV
Sbjct: 1010 LLLTFGKKRTQEVTHYQYTGWPEHMGPKDAEEIRYLLKLVTDSERPVFVV 1059


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,394,112
Number of Sequences: 27780
Number of extensions: 341428
Number of successful extensions: 1004
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)