Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_E14
         (334 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.          118   2e-29
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   1.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   1.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   5.2  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score =  118 bits (283), Expect = 2e-29
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +3

Query: 126 MSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 305
           MS QDYVDKQL+ASRCVTKAAIAGHDGN+WAKSEGFE+SK+E+ K+V GFE + +LTS G
Sbjct: 1   MSCQDYVDKQLLASRCVTKAAIAGHDGNLWAKSEGFEVSKEELTKLVQGFEEQDILTSSG 60

Query: 306 VTIAGTXYI 332
           VT+AG  YI
Sbjct: 61  VTLAGNRYI 69


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
 Frame = +3

Query: 57  AFAR-CEEYLVFNV*FYF*LNLIKM-----SWQDYVDKQLMASRCVTKAAIAGHDGN 209
           AF+R C  ++ FN   Y     +K+      + D +   L   RC  K    G DGN
Sbjct: 414 AFSRGCSGFVAFNGDQYDLKKNLKVCLPPGQYCDVISGNLEKGRCTGKIVTVGSDGN 470


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -2

Query: 225 PTL-PTHCHHDRQWQLL*HI 169
           PT+ P H HH  Q Q L H+
Sbjct: 345 PTMGPPHHHHHHQTQSLQHL 364


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 215 PHIAIMTGNGSFCDTSRCH 159
           PH  ++ G  +  DTS+ H
Sbjct: 259 PHDQVIIGGSNGLDTSKVH 277


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,201
Number of Sequences: 438
Number of extensions: 1164
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)