Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_E13
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016445-9|AAC69061.1|  156|Caenorhabditis elegans Hypothetical ...    30   0.72 
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ...    28   3.8  
Z79603-10|CAI79233.1|  224|Caenorhabditis elegans Hypothetical p...    27   6.7  
U80442-5|AAB37668.2|  794|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical...    27   8.9  

>AF016445-9|AAC69061.1|  156|Caenorhabditis elegans Hypothetical
           protein T05B4.13 protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 339 NSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNS 229
           N+  +RTC   P+  TA+ S TAS S   STC ++N+
Sbjct: 87  NTYCQRTCGRCPSSTTASSSSTASSS---STCTSYNA 120


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -1

Query: 420 STQGDGVQLSVXGPEP*T-------RVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCS 262
           STQ  G Q ++  P P           + +GA+ +S S  T + SP+ +++ GS   S S
Sbjct: 500 STQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTTMTSPSQSSSVGSSQGSTS 559

Query: 261 DMAST 247
             AST
Sbjct: 560 PAAST 564


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -1

Query: 420 STQGDGVQLSVXGPEP*T-------RVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCS 262
           STQ  G Q ++  P P           + +GA+ +S S  T + SP+ +++ GS   S S
Sbjct: 707 STQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTTMTSPSQSSSVGSSQGSTS 766

Query: 261 DMAST 247
             AST
Sbjct: 767 PAAST 771


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -1

Query: 420 STQGDGVQLSVXGPEP*T-------RVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCS 262
           STQ  G Q ++  P P           + +GA+ +S S  T + SP+ +++ GS   S S
Sbjct: 707 STQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTTMTSPSQSSSVGSSQGSTS 766

Query: 261 DMAST 247
             AST
Sbjct: 767 PAAST 771


>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
           protein R10F2.6 protein.
          Length = 1150

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -3

Query: 454 PFPPYLQILQAEHPRRWCPIKCXWPRTLNKSKCNRRIWE 338
           P PP    L+A  P RW PI    PR   K     RIW+
Sbjct: 407 PRPPKNLALEAR-PARWVPIPAKRPRGETKIDDLGRIWD 444


>Z79603-10|CAI79233.1|  224|Caenorhabditis elegans Hypothetical
           protein M163.11 protein.
          Length = 224

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 345 SGNSMSRRTCLDSPTFNTATGSFTAS-CSDMASTCITFNSXGLAS 214
           S NS S  +  DS +  ++T S T + C D  STC ++ + G  +
Sbjct: 104 SSNSSSSTSSSDSTSVVSSTSSSTTTTCVDSFSTCTSWAANGFCT 148


>U80442-5|AAB37668.2|  794|Caenorhabditis elegans Hypothetical
           protein T20F5.6 protein.
          Length = 794

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 146 DPEAKAEYPRSNKLVIRQALLGPDAKPXELNVIQVEAMSLQ 268
           + EA A   R+ K +   ALL PDA P   N   ++ + +Q
Sbjct: 690 EAEANANGQRAPKNIEMPALLNPDANPDAPNFKNLQPLQVQ 730


>AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical
           protein Y25C1A.4 protein.
          Length = 533

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -1

Query: 360 NVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNSXGLAS 214
           + T A G++ S  T    PT +TA G  TAS +   ST  T      AS
Sbjct: 82  STTAAGGSTAS--TAAGGPTGSTAAGGSTASTAAGGSTASTAAGGSTAS 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,553,915
Number of Sequences: 27780
Number of extensions: 198825
Number of successful extensions: 510
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)