Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_E07
(466 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1... 32 0.037
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 27 1.1
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 27 1.4
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 26 3.3
SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1 ... 25 4.3
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 25 4.3
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 25 4.3
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 5.7
SPAC29B12.05c |||mitochondrial S-adenosylmethionine-dependent me... 25 5.7
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 25 5.7
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 7.5
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 7.5
SPAC26H5.08c |bgl2||glucan 1,3-beta-glucosidase Bgl2|Schizosacch... 25 7.5
SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyc... 25 7.5
>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 32.3 bits (70), Expect = 0.037
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 12 VRHVFITRHTPRLWFCLLIKILYPNISMSSLIIVLFVFALAVYKLLXRKTVRWVKTNKYG 191
V HVF+T + L + Y I++S +I + + AL T+ W K NKYG
Sbjct: 397 VTHVFVTIFAVCMG-ALAVLFNYIGITISWIITFIGI-ALGPAVFGITLTLFWKKMNKYG 454
Query: 192 GVETAILRTAPGPVCWPIIGSLH 260
+ + + G VCW +GS +
Sbjct: 455 MIIGCPMGSITGVVCW--VGSCY 475
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 27.5 bits (58), Expect = 1.1
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +3
Query: 6 WSVRHVFITRHTPRLWFCLLIKILYPNISMSSLIIVLFVFALAVYKLLXRKTVRW 170
W VFIT T +W L + Y N + I V+FVF + + W
Sbjct: 246 WIGLAVFITMDTSDIWLALSKCLNYVNTVIVYPIFVIFVFVWIYMRHYLNFKIMW 300
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 27.1 bits (57), Expect = 1.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 123 FALAVYKLLXRKTVRWVKTNKYGGVET 203
FALA Y L R T+R ++T++ G + T
Sbjct: 185 FALAFYNLPFRSTIRDLRTDRIGRLTT 211
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 25.8 bits (54), Expect = 3.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 201 TAILRTAPGPVCWPIIGSLHLLGGHESPFQAFTELSKKYGD 323
T++ A G C + S LL H+SP F +SK GD
Sbjct: 244 TSVFVLADGTACIFTLSSSTLLKLHQSPEPHFELISKYSGD 284
>SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 4.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 215 DRTGARLLAHYRESTPSGRP 274
D AR +AH +ESTP +P
Sbjct: 235 DEKIARFIAHLKESTPDKKP 254
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 25.4 bits (53), Expect = 4.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 246 IGSLHLL--GGHESPFQAFTELSKKYGDIFSVKLGSADCVVVNNLSLIXQVLNXNGNV 413
+G H++ GG ++ Q+ L+K G I + +++ N S+I Q+LN N N+
Sbjct: 233 VGYHHVIEVGGEKTLPQSIACLAKD-GMISMIGFVASEGTTPNLTSIIGQILNRNANI 289
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 4.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 183 KYGGVETAILRTAPGPVCWPIIGSLHLLGGHE 278
KY GV L G WP+ + L+GGHE
Sbjct: 41 KYTGVCHTDLHALQGD--WPLPAKMPLIGGHE 70
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 25.0 bits (52), Expect = 5.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 141 KLLXRKTVRWVKTNKYGG 194
KL K V W KTN++GG
Sbjct: 290 KLHWPKNVEWWKTNEFGG 307
>SPAC29B12.05c |||mitochondrial S-adenosylmethionine-dependent
methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 5.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 51 WFCLLIKILYPNISMSSL 104
W C +K+LYP IS L
Sbjct: 37 WICKELKLLYPEISKHGL 54
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 25.0 bits (52), Expect = 5.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 240 PIIGSLHLLGGHESPFQAFTELSKKYGDIFS 332
P +GS G P+ F E KYGD+F+
Sbjct: 41 PFVGSAVAYG--MDPYVFFRECRAKYGDVFT 69
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 24.6 bits (51), Expect = 7.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 87 ISMSSLIIVLFVFALAVYKLLXRKTVRWVKTNKYG 191
I +SSLI+ L LAVY + +K VK N +G
Sbjct: 1071 IYLSSLIVPLLTGVLAVY--IFKKKFYHVKFNAFG 1103
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 24.6 bits (51), Expect = 7.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 103 NELILIFGYKIFMSKQNHSRGVWRVINTCRTLQR 2
NEL+ IF Y+ F Q ++ W ++ +C L+R
Sbjct: 342 NELMSIFDYEHFYLVQLLTKNRWTIV-SCTMLKR 374
>SPAC26H5.08c |bgl2||glucan 1,3-beta-glucosidase
Bgl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 321
Score = 24.6 bits (51), Expect = 7.5
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 355 QSALPNLTLK-MSPYFFDSSVKAWKGDS 275
Q AL N+ K + +FF++ + WKGDS
Sbjct: 269 QEALCNIRRKGIDIFFFEAFDEDWKGDS 296
>SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 24.6 bits (51), Expect = 7.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 249 GSLHLLGGHESPFQAFTELSKKYGDI 326
G L+ L H S F ++ KKYG+I
Sbjct: 179 GDLNDLSMHSSMFGFLAKIEKKYGNI 204
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,843,739
Number of Sequences: 5004
Number of extensions: 34892
Number of successful extensions: 106
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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