Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_E05
(312 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 53 2e-07
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 53 2e-07
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 53 2e-07
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 53 2e-07
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 53 2e-07
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 53 2e-07
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 53 2e-07
BC026089-1|AAH26089.1| 429|Homo sapiens solute carrier family 3... 28 5.0
AY029482-1|AAK40257.1| 146|Homo sapiens putative zinc transport... 28 5.0
AF025409-1|AAB82561.1| 429|Homo sapiens zinc transporter 4 prot... 28 5.0
AK123697-1|BAC85678.1| 184|Homo sapiens protein ( Homo sapiens ... 28 6.7
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MGRYSREPDNPAKSCKARGSNLRWFTLRTHMRPQWQSG-RCRSVVLFVTSKT*LKRKSVF 214
M RYS +P+NP KSCK+RGSNLR T Q G R ++ T L+++ V
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVT-LQKQCVP 59
Query: 215 IPSLHGGVGXCAQ 253
+GGVG CAQ
Sbjct: 60 FRRYNGGVGRCAQ 72
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIHSVASRXXWSLCS-TKQFGQQRVXG 285
VHFKNT ETA AI+ M +R+A +YLK+V +K+C+ C+ KQ+G +
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRW 83
Query: 286 PK 291
PK
Sbjct: 84 PK 85
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MGRYSREPDNPAKSCKARGSNLRWFTLRTHMRPQWQSG-RCRSVVLFVTSKT*LKRKSVF 214
M RYS +P+NP KSCK+RGSNLR T Q G R ++ T L+++ V
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVT-LQKQCVP 59
Query: 215 IPSLHGGVGXCAQ 253
+GGVG CAQ
Sbjct: 60 FRRYNGGVGRCAQ 72
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIHSVASRXXWSLCS-TKQFGQQRVXG 285
VHFKNT ETA AI+ M +R+A +YLK+V +K+C+ C+ KQ+G +
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRW 83
Query: 286 PK 291
PK
Sbjct: 84 PK 85
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MGRYSREPDNPAKSCKARGSNLRWFTLRTHMRPQWQSG-RCRSVVLFVTSKT*LKRKSVF 214
M RYS +P+NP KSCK+RGSNLR T Q G R ++ T L+++ V
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVT-LQKQCVP 59
Query: 215 IPSLHGGVGXCAQ 253
+GGVG CAQ
Sbjct: 60 FRRYNGGVGRCAQ 72
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIHSVASRXXWSLCS-TKQFGQQRVXG 285
VHFKNT ETA AI+ M +R+A +YLK+V +K+C+ C+ KQ+G +
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRW 83
Query: 286 PK 291
PK
Sbjct: 84 PK 85
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MGRYSREPDNPAKSCKARGSNLRWFTLRTHMRPQWQSG-RCRSVVLFVTSKT*LKRKSVF 214
M RYS +P+NP KSCK+RGSNLR T Q G R ++ T L+++ V
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVT-LQKQCVP 59
Query: 215 IPSLHGGVGXCAQ 253
+GGVG CAQ
Sbjct: 60 FRRYNGGVGRCAQ 72
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIHSVASRXXWSLCS-TKQFGQQRVXG 285
VHFKNT ETA AI+ M +R+A +YLK+V +K+C+ C+ KQ+G +
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRW 83
Query: 286 PK 291
PK
Sbjct: 84 PK 85
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MGRYSREPDNPAKSCKARGSNLRWFTLRTHMRPQWQSG-RCRSVVLFVTSKT*LKRKSVF 214
M RYS +P+NP KSCK+RGSNLR T Q G R ++ T L+++ V
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVT-LQKQCVP 59
Query: 215 IPSLHGGVGXCAQ 253
+GGVG CAQ
Sbjct: 60 FRRYNGGVGRCAQ 72
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIHSVASRXXWSLCS-TKQFGQQRVXG 285
VHFKNT ETA AI+ M +R+A +YLK+V +K+C+ C+ KQ+G +
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRW 83
Query: 286 PK 291
PK
Sbjct: 84 PK 85
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MGRYSREPDNPAKSCKARGSNLRWFTLRTHMRPQWQSG-RCRSVVLFVTSKT*LKRKSVF 214
M RYS +P+NP KSCK+RGSNLR T Q G R ++ T L+++ V
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVT-LQKQCVP 59
Query: 215 IPSLHGGVGXCAQ 253
+GGVG CAQ
Sbjct: 60 FRRYNGGVGRCAQ 72
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIHSVASRXXWSLCS-TKQFGQQRVXG 285
VHFKNT ETA AI+ M +R+A +YLK+V +K+C+ C+ KQ+G +
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRW 83
Query: 286 PK 291
PK
Sbjct: 84 PK 85
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MGRYSREPDNPAKSCKARGSNLRWFTLRTHMRPQWQSG-RCRSVVLFVTSKT*LKRKSVF 214
M RYS +P+NP KSCK+RGSNLR T Q G R ++ T L+++ V
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVT-LQKQCVP 59
Query: 215 IPSLHGGVGXCAQ 253
+GGVG CAQ
Sbjct: 60 FRRYNGGVGRCAQ 72
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIHSVASRXXWSLCS-TKQFGQQRVXG 285
VHFKNT ETA AI+ M +R+A +YLK+V +K+C+ C+ KQ+G +
Sbjct: 24 VHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRW 83
Query: 286 PK 291
PK
Sbjct: 84 PK 85
>BC026089-1|AAH26089.1| 429|Homo sapiens solute carrier family 30
(zinc transporter), member 4 protein.
Length = 429
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 115 FKNTYETAMAIRK-MPLRRAVRYLKNVIEKKECIHSVASRXXWSLCSTK 258
F+ ++T + I + +P V Y+K + K E ++SV WSL S K
Sbjct: 321 FRIIWDTVVIILEGVPSHLNVDYIKEALMKIEDVYSVEDLNIWSLTSGK 369
>AY029482-1|AAK40257.1| 146|Homo sapiens putative zinc transporter
4 protein.
Length = 146
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 115 FKNTYETAMAIRK-MPLRRAVRYLKNVIEKKECIHSVASRXXWSLCSTK 258
F+ ++T + I + +P V Y+K + K E ++SV WSL S K
Sbjct: 80 FRIIWDTVVIILEGVPSHLNVDYIKEALMKIEDVYSVEDLNIWSLTSGK 128
>AF025409-1|AAB82561.1| 429|Homo sapiens zinc transporter 4
protein.
Length = 429
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 115 FKNTYETAMAIRK-MPLRRAVRYLKNVIEKKECIHSVASRXXWSLCSTK 258
F+ ++T + I + +P V Y+K + K E ++SV WSL S K
Sbjct: 321 FRIIWDTVVIILEGVPSHLNVDYIKEALMKIEDVYSVEDLNIWSLTSGK 369
>AK123697-1|BAC85678.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ41703 fis, clone HEART2010391. ).
Length = 184
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 233 GVGXCAQPNSLANKGSLGQKIP 298
GV CAQP+ + SLG KIP
Sbjct: 122 GVSHCAQPHFSLSSQSLGHKIP 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,394,072
Number of Sequences: 237096
Number of extensions: 954248
Number of successful extensions: 5668
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5661
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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