Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_D19
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 123 2e-29
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 71 2e-13
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 55 7e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 37 0.003
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.006
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 32 0.060
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 31 0.14
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.74
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 3.0
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 26 5.2
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 25 6.9
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 9.1
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 25 9.1
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 123 bits (297), Expect = 2e-29
Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFR 388
FYAPWCGHCK L PEY AA L+ D ++L +VDCTE G C ++S+ GYPTL +F+
Sbjct: 46 FYAPWCGHCKALAPEYESAADELEKD--GISLVEVDCTEEG-DLCSEYSIRGYPTLNVFK 102
Query: 389 KGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTSK-DEXXVVGFFEKESDL 565
G+ S+Y+GPR+ + +VKYMR Q+ P+ K ++ E F K D+ VV FF K+ L
Sbjct: 103 NGKQISQYSGPRKHDALVKYMRKQLLPTVKP-ISKDTLENFVEKADDLAVVAFF-KDQKL 160
Query: 566 KGEFLKTADKLREEVTFAHSSXNE 637
+ + A+ ++++ FA S E
Sbjct: 161 NDTYTEVAEVMKDDFVFAASDDKE 184
Score = 58.0 bits (134), Expect = 1e-09
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFR 388
FYAPWCGHCK L P Y A D V +AK+D TE S S+SG+PT+ F+
Sbjct: 380 FYAPWCGHCKNLAPTYEKLAEEYSDD-SNVVVAKIDATENDISV----SISGFPTIMFFK 434
Query: 389 KGELSS--EYNGPRESNGIVKYM--RAQVGPSSKE 481
+ + Y G R + ++ A P KE
Sbjct: 435 ANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIKKE 469
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 70.5 bits (165), Expect = 2e-13
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Frame = +2
Query: 152 LQIPTFRLFYLNMIQPWXMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDC-TEG 328
L FR F +FYAPWCG+CK+L P Y A L + +P A VDC +
Sbjct: 36 LNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTA---VDCDADQ 92
Query: 329 GKSTCEQFSVSGYPTLKIF---RKGE--LSSEYNGPRESNGIVKYMRAQVGPSSKELLT 490
++ C Q+ V G+PT+K+ KG S++YNG R + K++ + PS ++LT
Sbjct: 93 NRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 55.2 bits (127), Expect = 7e-09
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIF- 385
FYA WCGHCK L P Y G L D V + K+D + +++ ++G+PTL F
Sbjct: 46 FYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTLIWFP 103
Query: 386 RKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTSKDEXXVVGFFEKESDL 565
G +Y+ R+ + + +++ + G ++++ ++ S + VV + + D+
Sbjct: 104 PDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLNFDKVV--MDDKKDV 161
Query: 566 KGEF 577
EF
Sbjct: 162 LVEF 165
Score = 53.2 bits (122), Expect = 3e-08
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFR 388
FYA WCG+CKRL P Y + K + P V + K++ + V+ +PT+K F
Sbjct: 165 FYADWCGYCKRLAPTYETLGKVFKNE-PNVEIVKIN-ADVFADIGRLHEVASFPTIKFFP 222
Query: 389 KGELSSE--YNGPRESNGIVKYMRAQVG 466
K + Y G R +++Y+ + G
Sbjct: 223 KDDKDKPELYEGDRSLESLIEYINKKSG 250
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 36.7 bits (81), Expect = 0.003
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDV--PPVALAKVDCTEGGKSTCEQFSVSGYPTLKI 382
+Y P CG CKRL P + K V +VDC++ S+C ++ PTL +
Sbjct: 49 YYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK-ELSSCA--NIRAVPTLYL 105
Query: 383 FRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTSKDEXXV 535
++ GE+ E + ++ ++ + P + + +D + T +D V
Sbjct: 106 YQNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIP-SDEDVLTDEDTEEV 157
Score = 31.5 bits (68), Expect = 0.11
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFR 388
FY+ C C + + A ++ + +A ++C K C+Q+S+ +PT +F
Sbjct: 305 FYSSECDDCDDVSTAWYAMANRMRGKLN---VAHINCAVS-KRACKQYSIQYFPTF-LFF 359
Query: 389 KGELSSEYNGPRESNGIVKY 448
K E EY G +V +
Sbjct: 360 KEEAFVEYVGLPNEGDLVSF 379
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.5 bits (78), Expect = 0.006
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +2
Query: 212 YAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 391
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 392 GE 397
G+
Sbjct: 84 GK 85
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 32.3 bits (70), Expect = 0.060
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFR 388
FYA WCG CK LKP L + V+ + ++ V PT+ +FR
Sbjct: 42 FYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIAQKNGVYALPTMVLFR 96
Query: 389 KGE 397
KG+
Sbjct: 97 KGQ 99
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFR 388
F+A WCG CK + P++ KVD + + E V P+ +++
Sbjct: 25 FFATWCGPCKAIAPKFE----QFSNTYSDATFIKVDVDQLSEIAAEA-GVHAMPSFFLYK 79
Query: 389 KGELSSEYNG 418
GE E G
Sbjct: 80 NGEKIEEIVG 89
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.74
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = -2
Query: 591 SAVFRNSP-FRSDSFSKNPTTXXSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGP 415
SA F +SP F S+S S PT+ SS+ S +++ ++L T + +T G
Sbjct: 447 SATFTSSPPFYSNS-SVIPTSAPSSVSSFTSSNSSYTTTL----TASNTTVTFTGTGTGS 501
Query: 414 LYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGGTSVFN 274
+ SSP+ + S+ P T + S + S + S+ GTS +
Sbjct: 502 ATATSSSPYYSNSSIIVPTTVSTSGSVSSFSSSPSPTSSFSGTSALS 548
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/70 (22%), Positives = 27/70 (38%)
Frame = +2
Query: 209 FYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFR 388
FYAPW CK++ + A D K++ E E F V+ P +
Sbjct: 27 FYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFVLIH 81
Query: 389 KGELSSEYNG 418
++ + +G
Sbjct: 82 GAKVLARISG 91
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 25.8 bits (54), Expect = 5.2
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 161 PTFRLFYLNMIQPWXMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGG 331
P ++ YL++ +P + G EY + LKT VP + LAK GG
Sbjct: 373 PARQIIYLSVAKPRALVVLEDAGVLSPTVVEYVEKSLELKTYVPALKLAKDGSLTGG 429
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 6.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 136 EDVLDLTDSDFSAVLSQHDTALXHVLRALVRSL*ETKAR 252
E+V D+TDSD ++ L DT RA V S+ ET+ R
Sbjct: 397 EEVTDMTDSDTASGLIFDDT------RAFVNSIKETENR 429
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 152 LQIPTFRLFYLNMIQPWXMFYAPWCGHCKRLK 247
L PTF F L ++ + +A CG +RLK
Sbjct: 1587 LVAPTFNSFPLRVLLDSKLSFAEVCGQLQRLK 1618
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 109 IIYLCKAAEEDVLDLTDSDFSAVLSQHD 192
+IY C+AA+E++LD LS+ D
Sbjct: 6 LIYACRAADEELLDEIIEKCPQELSRRD 33
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,506,186
Number of Sequences: 5004
Number of extensions: 49230
Number of successful extensions: 167
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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