Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_D16
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical... 135 2e-32
AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical... 135 2e-32
Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical pr... 33 0.13
U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activati... 32 0.31
AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase activa... 32 0.31
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 31 0.94
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.6
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 30 1.6
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 30 1.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.6
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.6
AF025451-2|AAK68202.1| 612|Caenorhabditis elegans Hypothetical ... 29 3.8
AF025451-1|AAB71201.1| 610|Caenorhabditis elegans Hypothetical ... 29 3.8
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical... 28 5.0
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 6.6
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 6.6
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 6.6
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 6.6
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 6.6
AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical ... 28 6.6
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 6.6
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 27 8.7
U40801-2|AAA81502.2| 324|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC006693-2|AAF60378.2| 334|Caenorhabditis elegans Serpentine re... 27 8.7
>AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical
protein Y53F4B.39b protein.
Length = 329
Score = 135 bits (327), Expect = 2e-32
Identities = 64/119 (53%), Positives = 83/119 (69%)
Frame = +3
Query: 291 WLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMK 470
++ DG E+ V+GAT+K+ TPGHT DH L EE LFSGDCILGEGT VFEDL+ YM
Sbjct: 153 YVDDGFEVAVDGATLKLIATPGHTADHFSLWLQEERALFSGDCILGEGTTVFEDLHDYMT 212
Query: 471 SLQKILDLKPNIIYPGHGNIVKDPVEKIEYYIAHRNQREEQILEALKTNSDKNLNEMDL 647
SLQKI DL IYPGHG ++ VEK++ YI HR +RE +I++ LK + + + MD+
Sbjct: 213 SLQKIKDLNATRIYPGHGPVIDKVVEKVDEYIEHRMKREREIIKVLKEHEE--ITSMDV 269
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +3
Query: 42 GFKIFINLKF*RTYPFSTMAAVIPPVTKLSTSIIRILGCNPGPMTLQGTNTYLIGS 209
G +N K R P T + P+ KLS ++ RILG NPGP TLQGTNTYL+G+
Sbjct: 22 GVAYLVNSKAHRAMPSLTH---VEPIEKLSDAVTRILGHNPGPFTLQGTNTYLLGT 74
>AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical
protein Y53F4B.39a protein.
Length = 295
Score = 135 bits (327), Expect = 2e-32
Identities = 64/119 (53%), Positives = 83/119 (69%)
Frame = +3
Query: 291 WLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMK 470
++ DG E+ V+GAT+K+ TPGHT DH L EE LFSGDCILGEGT VFEDL+ YM
Sbjct: 119 YVDDGFEVAVDGATLKLIATPGHTADHFSLWLQEERALFSGDCILGEGTTVFEDLHDYMT 178
Query: 471 SLQKILDLKPNIIYPGHGNIVKDPVEKIEYYIAHRNQREEQILEALKTNSDKNLNEMDL 647
SLQKI DL IYPGHG ++ VEK++ YI HR +RE +I++ LK + + + MD+
Sbjct: 179 SLQKIKDLNATRIYPGHGPVIDKVVEKVDEYIEHRMKREREIIKVLKEHEE--ITSMDV 235
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 108 IPPVTKLSTSIIRILGCNPGPMTLQGTNTYLIGS 209
+ P+ KLS ++ RILG NPGP TLQGTNTYL+G+
Sbjct: 7 VEPIEKLSDAVTRILGHNPGPFTLQGTNTYLLGT 40
>Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical
protein C03A3.3 protein.
Length = 290
Score = 35.5 bits (78), Expect = 0.033
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = +3
Query: 291 WLRDGQEIKVEGAT-----VKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDL 455
WL DG +I + + V+V TPGHT D IVL N LF GD +F
Sbjct: 129 WLNDGDKIILGDESHLMNIVQVMWTPGHTPDSIVLWYPYANRLFVGDLFYRFDDIMFTYQ 188
Query: 456 YT----YMKSLQKIL 488
YT Y S++ IL
Sbjct: 189 YTDIRQYENSVRSIL 203
>Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical
protein C33A12.7 protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 288 EWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENI--LFSGDCIL 425
+++ DG+ I++ G ++V TPGHT LT +E ++ F+GD +L
Sbjct: 98 KYVSDGEIIEIGGLKLEVRETPGHTNG--CLTYVEHSLRSAFTGDALL 143
>U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activating
protein familyprotein 1 protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 375 VLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPNI--IYPGHGNIVKDP 542
+L C +EN LF G + G +FE L TY K + I LKP + IY N DP
Sbjct: 197 ILKCQDENTLFRGQSL--SGKMLFEILTTYGK-MYLITTLKPVVDKIYKERKNCEVDP 251
>AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase
activating protein GAP-1 protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 375 VLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPNI--IYPGHGNIVKDP 542
+L C +EN LF G + G +FE L TY K + I LKP + IY N DP
Sbjct: 197 ILKCQDENTLFRGQSL--SGKMLFEILTTYGK-MYLITTLKPVVDKIYKERKNCEVDP 251
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 282 PIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFE 449
P++ +E K E + + P HT D IV E I+F G +L +GT + E
Sbjct: 156 PLDSAAPVEEHKEESHSSEHTEAPAHTEDSIVQADPEARIVFQG--VLADGTQIIE 209
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 192 TYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 371
T+ E+ +I + + + D+ N + P I WL+DG EI +G V G
Sbjct: 2464 TFAKNLEDRLITEGELTLMDAKLNIVKPKPKITWLKDGVEITSDGHYKIVEEEDGSLKLS 2523
Query: 372 IVLTCLEE 395
I+ T LE+
Sbjct: 2524 ILQTKLED 2531
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 288 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 455
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 456 YTYMKSLQK 482
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +3
Query: 273 PSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVF 446
P + WL+DG+EI + + H G H++ C+ + + +FS GT +
Sbjct: 1757 PKPTVTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIA 1815
Query: 447 ED--LYTYMKSLQKILDLKPNIIYP 515
E + MK ++ ++ P P
Sbjct: 1816 ETQVIVQRMKPANQLANVAPKFTIP 1840
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +3
Query: 273 PSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVF 446
P + WL+DG+EI + + H G H++ C+ + + +FS GT +
Sbjct: 1772 PKPTVTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIA 1830
Query: 447 ED--LYTYMKSLQKILDLKPNIIYP 515
E + MK ++ ++ P P
Sbjct: 1831 ETQVIVQRMKPANQLANVAPKFTIP 1855
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +3
Query: 273 PSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVF 446
P + WL+DG+EI + + H G H++ C+ + + +FS GT +
Sbjct: 17583 PKPTVTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIA 17641
Query: 447 ED--LYTYMKSLQKILDLKPNIIYP 515
E + MK ++ ++ P P
Sbjct: 17642 ETQVIVQRMKPANQLANVAPKFTIP 17666
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +3
Query: 273 PSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCL--EENILFSGDCILGEGTAVF 446
P + WL+DG+EI + + H G H++ C+ + + +FS GT +
Sbjct: 17598 PKPTVTWLKDGREI-LRTNRIYHHFVTGDGESHLIAECVVSKTSGIFSCKAENPNGTVIA 17656
Query: 447 ED--LYTYMKSLQKILDLKPNIIYP 515
E + MK ++ ++ P P
Sbjct: 17657 ETQVIVQRMKPANQLANVAPKFTIP 17681
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 192 TYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 371
T+ E+ +I + + + D+ N + P I WL+DG EI +G V G
Sbjct: 1824 TFAKNLEDRLITEGELTLMDAKLNIVKPKPKITWLKDGVEITSDGHYKIVEEEDGSLKLS 1883
Query: 372 IVLTCLEE 395
I+ T LE+
Sbjct: 1884 ILQTKLED 1891
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 288 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 455
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2279 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2338
Query: 456 YTYMKSLQK 482
T ++SL+K
Sbjct: 2339 LTVIESLEK 2347
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 192 TYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 371
T+ E+ +I + + + D+ N + P I WL+DG EI +G V G
Sbjct: 2464 TFAKNLEDRLITEGELTLMDAKLNIVKPKPKITWLKDGVEITSDGHYKIVEEEDGSLKLS 2523
Query: 372 IVLTCLEE 395
I+ T LE+
Sbjct: 2524 ILQTKLED 2531
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 288 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 455
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 456 YTYMKSLQK 482
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 192 TYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 371
T+ E+ +I + + + D+ N + P I WL+DG EI +G V G
Sbjct: 2464 TFAKNLEDRLITEGELTLMDAKLNIVKPKPKITWLKDGVEITSDGHYKIVEEEDGSLKLS 2523
Query: 372 IVLTCLEE 395
I+ T LE+
Sbjct: 2524 ILQTKLED 2531
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 288 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 455
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 456 YTYMKSLQK 482
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 192 TYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 371
T+ E+ +I + + + D+ N + P I WL+DG EI +G V G
Sbjct: 1824 TFAKNLEDRLITEGELTLMDAKLNIVKPKPKITWLKDGVEITSDGHYKIVEEEDGSLKLS 1883
Query: 372 IVLTCLEE 395
I+ T LE+
Sbjct: 1884 ILQTKLED 1891
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 288 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 455
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2279 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2338
Query: 456 YTYMKSLQK 482
T ++SL+K
Sbjct: 2339 LTVIESLEK 2347
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 192 TYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 371
T+ E+ +I + + + D+ N + P I WL+DG EI +G V G
Sbjct: 2464 TFAKNLEDRLITEGELTLMDAKLNIVKPKPKITWLKDGVEITSDGHYKIVEEEDGSLKLS 2523
Query: 372 IVLTCLEE 395
I+ T LE+
Sbjct: 2524 ILQTKLED 2531
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 288 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 455
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 456 YTYMKSLQK 482
T ++SL+K
Sbjct: 2979 LTVIESLEK 2987
>AF025451-2|AAK68202.1| 612|Caenorhabditis elegans Hypothetical
protein C24H12.5b protein.
Length = 612
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 165 GPMTLQGTNTYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVK 338
GP T G E+P+ K +DS +NE P + +WL EI V TVK
Sbjct: 406 GPTTFGGIENSENSDESPL-----KKDQDSDENESPMKLANQWL---NEIGVSPRTVK 455
>AF025451-1|AAB71201.1| 610|Caenorhabditis elegans Hypothetical
protein C24H12.5a protein.
Length = 610
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 165 GPMTLQGTNTYLIGSENPIIWKHKKSSEDSADNELPPSIPIEWLRDGQEIKVEGATVK 338
GP T G E+P+ K +DS +NE P + +WL EI V TVK
Sbjct: 404 GPTTFGGIENSENSDESPL-----KKDQDSDENESPMKLANQWL---NEIGVSPRTVK 453
>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
protein F25G6.2 protein.
Length = 1143
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 462 YMKSLQKILDLKPNIIYPGHGNIVKDPVEKIEYY--IAHRNQREEQIL 599
Y KS+ + + P GN+V DP+E I+ Y I +N E ++L
Sbjct: 918 YQKSVNVLFRKLYTVRDPQTGNLVFDPIEVIKEYHKIEPKNDNEAELL 965
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 273 PSIPIEWLRDGQEI 314
PSI +EWL+DGQ I
Sbjct: 2705 PSIKVEWLKDGQPI 2718
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 273 PSIPIEWLRDGQEI 314
PSI +EWL+DGQ I
Sbjct: 2622 PSIKVEWLKDGQPI 2635
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 273 PSIPIEWLRDGQEI 314
PSI +EWL+DGQ I
Sbjct: 2943 PSIKVEWLKDGQPI 2956
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 273 PSIPIEWLRDGQEI 314
PSI +EWL+DGQ I
Sbjct: 2943 PSIKVEWLKDGQPI 2956
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 273 PSIPIEWLRDGQEI 314
PSI +EWL+DGQ I
Sbjct: 2943 PSIKVEWLKDGQPI 2956
>AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical
protein C53D5.2 protein.
Length = 254
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 636 HLDFYQNLFSKL-LIFVLLFDFCELYNIQFFQRDPLL 529
H+D L + L LI VL+ FC + IQF Q + LL
Sbjct: 88 HVDRSSCLLNVLFLITVLIMIFCGYFTIQFIQENALL 124
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 273 PSIPIEWLRDGQEI 314
PSI +EWL+DGQ I
Sbjct: 2638 PSIKVEWLKDGQPI 2651
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 426 GEGTAVFEDLYTYMKSLQKILDLKPNIIYPGHGNIVKDPV---EKI-EYYIAHRNQREEQ 593
G GT F+DLY K + I+DL+ + H + K V EK+ + ++ + +
Sbjct: 18 GNGTNTFDDLYVDDKMRRMIVDLQRQWLTDYHDSREKSLVALTEKLHQEFMEDQERVRRD 77
Query: 594 ILEALKTNSDKNLNEMD 644
+L K D+ E++
Sbjct: 78 LLVQFKIELDQTKEELE 94
>U40801-2|AAA81502.2| 324|Caenorhabditis elegans Hypothetical
protein F28E10.4 protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 578 ISVSYIIFN-FFNGILYYIPMTRVNNV 501
++VSYI N FFNG++ + RVNNV
Sbjct: 44 MTVSYICSNSFFNGLIMGDKIIRVNNV 70
>AC006693-2|AAF60378.2| 334|Caenorhabditis elegans Serpentine
receptor, class h protein271 protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 590 FFSLISVSYIIFNFFNGILYYIP 522
F+ + VSY FN+ +L++IP
Sbjct: 126 FWKFVRVSYFAFNYILALLFFIP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,511,911
Number of Sequences: 27780
Number of extensions: 357104
Number of successful extensions: 1185
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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