Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_D11
         (537 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157...    29   1.8  
06_01_0127 - 977667-978719,978875-979051                               29   2.3  
07_01_0230 - 1679165-1681108                                           28   4.1  
02_05_0020 + 25070664-25070692,25070934-25071513,25071605-250718...    28   5.4  
12_02_0191 + 15178717-15179045,15179147-15179546,15179624-151796...    27   7.2  
10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096     27   7.2  
05_03_0194 + 9547626-9547715,9549235-9549311,9549493-9549564,954...    27   7.2  
01_03_0207 - 13790801-13792057                                         27   7.2  

>04_04_0411 -
           25014511-25015015,25015098-25015169,25015700-25015734,
           25015805-25015873,25015993-25016044,25016444-25016526,
           25016625-25016726,25017150-25017884,25017962-25018012,
           25018792-25018983,25019066-25019216,25020012-25020193,
           25020329-25020532,25020752-25020859
          Length = 846

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  EPEEFQDSGEDWTPDADSNEPASRTGR 110
           E  EF D G D  PDA S+ P  R GR
Sbjct: 636 EKWEFIDEGRDNNPDASSDMPHGRRGR 662


>06_01_0127 - 977667-978719,978875-979051
          Length = 409

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 305 CTKAFPFRKFCLAEIRCKMGWRYCN 379
           C +  P+R+ CLA  +C+ G  Y N
Sbjct: 130 CARLGPYRRGCLANSQCQFGITYAN 154


>07_01_0230 - 1679165-1681108
          Length = 647

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 135 SPVPLIHVFCQYEMQVRSNRRPASN-LHQSPEILL 34
           SP+  ++ F  + ++V   RRP +N  H SP IL+
Sbjct: 506 SPLTDVYAFAIFVLEVTCGRRPINNYTHDSPTILV 540


>02_05_0020 +
           25070664-25070692,25070934-25071513,25071605-25071817,
           25071918-25072207,25072301-25072412,25072539-25072763,
           25072853-25073464
          Length = 686

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGM 505
           I  E   NG+   SFTQ Y   FW G+
Sbjct: 341 IYGEALDNGLTSSSFTQKYFYCFWWGL 367


>12_02_0191 +
           15178717-15179045,15179147-15179546,15179624-15179668,
           15180506-15180571,15181829-15181890,15182161-15182326,
           15183384-15183507,15184177-15184283,15184395-15184505
          Length = 469

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +1

Query: 223 GNLMKKKDLMMRKTDPMETNLIQVNRKMYQSISIQ 327
           G+L   KD+ +  +DP + N + + RK ++SI ++
Sbjct: 15  GDLKFFKDITVTTSDPSKKNAVVMGRKTWESIPLK 49


>10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096
          Length = 404

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 486 HMYICVKLFHLIPLG*ISVIMLCHQFSTSSVHQVLILQYLHPILHLISARQNFLNGNA 313
           H+ +    ++L  L  I    LC   ST +V  +L+L   H    L  A  NFL  +A
Sbjct: 275 HLLVAADRYNLERLKLICEEKLCKHISTGTVSNMLLLADQHHCSGLQKACCNFLGSSA 332


>05_03_0194 +
           9547626-9547715,9549235-9549311,9549493-9549564,
           9549648-9549719,9550047-9550118,9550199-9550225,
           9550226-9550297,9550382-9550453,9550897-9550968,
           9551047-9551121,9551226-9551297,9551384-9551449,
           9551544-9551609,9551683-9551727,9551822-9551886,
           9551971-9552350,9552419-9552545,9552688-9552846,
           9552929-9553047,9553182-9553392,9553582-9553762,
           9553845-9553995,9554086-9554448
          Length = 901

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 529 GNNCHGCQHSTPEYTHVHLCKTLPFDSIGINFCNNALPSIFHKFS 395
           GN    C  +T      HL    P  ++G N+   A+PS F KF+
Sbjct: 32  GNKFERCWRNTFGAAEFHLYAG-PVWNLGYNYLTGAVPSFFGKFT 75


>01_03_0207 - 13790801-13792057
          Length = 418

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 168 MMSFYVSFWCCSPVPLIHVFCQYEMQVRSNRRPAS-NLHQSPEILLV 31
           ++ FYV  +C   +PLI V  +Y   +  NRR AS ++   P +LLV
Sbjct: 362 VIMFYVLIYCVCFLPLIGV--EYRPGMSVNRRKASISIQLRPIMLLV 406


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,941,012
Number of Sequences: 37544
Number of extensions: 237452
Number of successful extensions: 827
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)