Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_D11
(537 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protei... 31 2.6
AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protei... 31 2.6
AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protei... 31 2.6
AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protei... 31 2.6
AK091431-1|BAC03664.1| 992|Homo sapiens protein ( Homo sapiens ... 31 2.6
AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein. 31 2.6
AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein. 31 2.6
X65172-1|CAA46291.1| 465|Homo sapiens neuromedin K receptor pro... 30 6.0
S86392-1|AAB21706.1| 465|Homo sapiens neurokinin-3 receptor pro... 30 6.0
M89473-1|AAA36366.1| 465|Homo sapiens neurokinin-3 receptor pro... 30 6.0
M84605-1|AAA36395.1| 440|Homo sapiens putative opioid receptor ... 30 6.0
BC122551-1|AAI22552.1| 465|Homo sapiens tachykinin receptor 3 p... 30 6.0
BC121806-1|AAI21807.1| 465|Homo sapiens tachykinin receptor 3 p... 30 6.0
BC095527-1|AAH95527.1| 464|Homo sapiens TACR3 protein protein. 30 6.0
AY462099-1|AAR23926.1| 465|Homo sapiens tachykinin receptor 3 p... 30 6.0
>AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protein
splice variant 3 protein.
Length = 863
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 342 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 503
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protein
splice variant 2 protein.
Length = 1427
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 342 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 503
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protein
splice variant 1 protein.
Length = 3997
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 342 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 503
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protein
protein.
Length = 4022
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 342 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 503
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AK091431-1|BAC03664.1| 992|Homo sapiens protein ( Homo sapiens
cDNA FLJ34112 fis, clone FCBBF3008870. ).
Length = 992
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 342 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 503
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 83 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 127
>AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein.
Length = 3997
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 342 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 503
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKDENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein.
Length = 4022
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 342 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 503
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKDENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>X65172-1|CAA46291.1| 465|Homo sapiens neuromedin K receptor
protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 320 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 350
>S86392-1|AAB21706.1| 465|Homo sapiens neurokinin-3 receptor
protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 320 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 350
>M89473-1|AAA36366.1| 465|Homo sapiens neurokinin-3 receptor
protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 320 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 350
>M84605-1|AAA36395.1| 440|Homo sapiens putative opioid receptor
protein.
Length = 440
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 295 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 325
>BC122551-1|AAI22552.1| 465|Homo sapiens tachykinin receptor 3
protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 320 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 350
>BC121806-1|AAI21807.1| 465|Homo sapiens tachykinin receptor 3
protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 320 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 350
>BC095527-1|AAH95527.1| 464|Homo sapiens TACR3 protein protein.
Length = 464
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 319 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 349
>AY462099-1|AAR23926.1| 465|Homo sapiens tachykinin receptor 3
protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 425 IITEIYPNGIKWKSFTQMYMCVFWGGMLTTV 517
I+T IY +WK Q+Y+ FW M +T+
Sbjct: 320 ILTAIYQQLNRWKYIQQVYLASFWLAMSSTM 350
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,757,426
Number of Sequences: 237096
Number of extensions: 1279080
Number of successful extensions: 3910
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3910
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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