Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_D03
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 99 2e-21
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 99 2e-21
05_01_0043 - 295041-295173,296252-296537,296616-296697 99 2e-21
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 97 6e-21
01_07_0267 + 42410174-42410252,42410679-42411097 93 1e-19
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 40 0.002
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 31 0.73
10_08_0401 + 17629912-17630376 29 2.2
01_06_0383 - 28903620-28904077,28904172-28904259 28 3.9
04_04_0461 + 25390552-25391904 28 5.2
05_04_0242 + 19336663-19336789,19337071-19337290,19337392-193374... 27 6.8
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 27 6.8
12_02_1175 + 26702744-26704507 27 9.0
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 27 9.0
07_01_0167 + 1175694-1176015,1176129-1176803,1177064-1177107 27 9.0
04_03_0831 - 20133298-20133401,20133500-20133586,20133984-201340... 27 9.0
02_02_0454 + 10436491-10436820,10437487-10437570,10437667-104377... 27 9.0
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +1
Query: 187 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IY
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIY 68
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = +1
Query: 187 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IY
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIY 68
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = +1
Query: 187 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IY
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIY 69
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 97.5 bits (232), Expect = 6e-21
Identities = 41/57 (71%), Positives = 52/57 (91%)
Frame = +1
Query: 187 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IY
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIY 70
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +1
Query: 169 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 348
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 349 AIY 357
IY
Sbjct: 66 GIY 68
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 193 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIY
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIY 74
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 30.7 bits (66), Expect = 0.73
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 385 WCPPGAXXLPPLQRVHPLGCWFGCXILWSW 474
W PPG LPPL +H FG W W
Sbjct: 44 WAPPGEPRLPPLLLIH----GFGPMATWQW 69
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 199 VMGAASAIIFSALGAAYGTAKSGTGIAA 282
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>01_06_0383 - 28903620-28904077,28904172-28904259
Length = 181
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 452 PNQHPSG*TLCKGGXXXAPGGHQQSGPPRP 363
P QH C GG GG + S PP P
Sbjct: 95 PPQHQQKPAPCSGGPAGVVGGRRPSAPPAP 124
>04_04_0461 + 25390552-25391904
Length = 450
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 187 PFFGVMGAASAIIFSALGA-AYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYRS 363
P G+ AASA+ F LGA A+ A+ + + L++ + + A A Y
Sbjct: 183 PLPGIFAAASAVYFVFLGAWAWACARHRATAGQIHAVMGALLLFKALKLACAAEDAWYVE 242
Query: 364 GRGGPDCW 387
G P W
Sbjct: 243 RTGTPHGW 250
>05_04_0242 +
19336663-19336789,19337071-19337290,19337392-19337437,
19337559-19337675
Length = 169
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +1
Query: 175 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 354
PIY P G + +IF+ L G + S TG+ +S P +M + ++ + +
Sbjct: 54 PIYFPI-GNLATGFFVIFALLAGVVGVSTSLTGLHDVSQGYPASMMSAAAASIVTWTLTL 112
Query: 355 YRSGRGGPDC---WCPPGAXXL 411
G + W PP L
Sbjct: 113 LAMGLACKEISIGWRPPSLRAL 134
>04_01_0567 -
7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 65 FVCAK-VVSWSECVQIVITVFGTC 133
F+CA VV WS + + + VFGTC
Sbjct: 553 FMCANTVVLWSGPLAMTVLVFGTC 576
>12_02_1175 + 26702744-26704507
Length = 587
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 196 GVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSI-IPVVMAGIIAIYRSGRG 372
G S+++ A GA G G G A V ++ ++ + V+AG++AI RG
Sbjct: 161 GAPDVLSSVVAFAAGARGGDGGGGGGEDAGDVGLSGVLGGALFVSTVVAGVVAIVAGRRG 220
Query: 373 G 375
G
Sbjct: 221 G 221
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 271 GIAAMSVMRPELIMKSIIPVVMAG--IIAIYRSGRGGPDCWCPPGAXXLPP 417
GI RP I + IP+ + G I+A ++G G +C P + P
Sbjct: 161 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDP 211
>07_01_0167 + 1175694-1176015,1176129-1176803,1177064-1177107
Length = 346
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 463 LWSWLPVSPXASW 501
LWSW PVS A+W
Sbjct: 246 LWSWKPVSAAAAW 258
>04_03_0831 -
20133298-20133401,20133500-20133586,20133984-20134092,
20134272-20134442,20136059-20136208,20136765-20136872,
20137725-20137780,20138061-20138124,20138198-20138209
Length = 286
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 187 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 336
P FGV + ++I +G+ Y +SG + A + L + PV++
Sbjct: 9 PTFGVGHSLGSVIHLLIGSRYAVQRSGNILMAFNNKEASLAVPLFSPVIV 58
>02_02_0454 +
10436491-10436820,10437487-10437570,10437667-10437797,
10437873-10437948,10438366-10438436,10438559-10438645,
10438725-10438797,10438881-10438948,10439020-10439088,
10439160-10439265,10439831-10439887,10440297-10440389
Length = 414
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 1 ALPSTFFVIXPILLSLQSLGHICLC 75
+LPSTFFV+ + L L S G + C
Sbjct: 68 SLPSTFFVLPLLALGLDSRGVLLRC 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,958,987
Number of Sequences: 37544
Number of extensions: 349428
Number of successful extensions: 990
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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