Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_D03
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-3|CAA82355.1|  161|Caenorhabditis elegans Hypothetical pr...    98   3e-21
AC024762-4|AAF59473.1|  161|Caenorhabditis elegans Vacuolar h at...    98   3e-21
AB009566-1|BAA75066.1|  161|Caenorhabditis elegans Vha3 protein ...    98   3e-21
AB000918-1|BAA22596.1|  161|Caenorhabditis elegans VHA-2 protein.      98   3e-21
Z29095-6|CAA82354.1|  169|Caenorhabditis elegans Hypothetical pr...    96   1e-20
AB000917-1|BAA22595.1|  169|Caenorhabditis elegans VHA-1 protein.      96   1e-20
AF022973-5|AAC25797.4|  479|Caenorhabditis elegans Acetylcholine...    31   0.37 

>Z29095-3|CAA82355.1|  161|Caenorhabditis elegans Hypothetical
           protein R10E11.2 protein.
          Length = 161

 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +1

Query: 181 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
           Y PFFG MGAASA IF+ LGAAYGTAKS  GI +M VMRPELIMKS+IPV+MAGII IY
Sbjct: 13  YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIY 71


>AC024762-4|AAF59473.1|  161|Caenorhabditis elegans Vacuolar h
           atpase protein 3 protein.
          Length = 161

 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +1

Query: 181 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
           Y PFFG MGAASA IF+ LGAAYGTAKS  GI +M VMRPELIMKS+IPV+MAGII IY
Sbjct: 13  YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIY 71


>AB009566-1|BAA75066.1|  161|Caenorhabditis elegans Vha3 protein
           protein.
          Length = 161

 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +1

Query: 181 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
           Y PFFG MGAASA IF+ LGAAYGTAKS  GI +M VMRPELIMKS+IPV+MAGII IY
Sbjct: 13  YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIY 71


>AB000918-1|BAA22596.1|  161|Caenorhabditis elegans VHA-2 protein.
          Length = 161

 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +1

Query: 181 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
           Y PFFG MGAASA IF+ LGAAYGTAKS  GI +M VMRPELIMKS+IPV+MAGII IY
Sbjct: 13  YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIY 71


>Z29095-6|CAA82354.1|  169|Caenorhabditis elegans Hypothetical
           protein R10E11.8 protein.
          Length = 169

 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 42/60 (70%), Positives = 54/60 (90%)
 Frame = +1

Query: 178 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
           +YGPFFG +G  SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20  MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79


>AB000917-1|BAA22595.1|  169|Caenorhabditis elegans VHA-1 protein.
          Length = 169

 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 42/60 (70%), Positives = 54/60 (90%)
 Frame = +1

Query: 178 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 357
           +YGPFFG +G  SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20  MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79


>AF022973-5|AAC25797.4|  479|Caenorhabditis elegans Acetylcholine
           receptor protein 15 protein.
          Length = 479

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = +2

Query: 92  SECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPM 250
           SE V ++   F TC +  +  T +   +QS           ++ W R +L   +PW L M
Sbjct: 283 SEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRM 342

Query: 251 ELPSQE 268
           ++P +E
Sbjct: 343 KMPDRE 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,866
Number of Sequences: 27780
Number of extensions: 278190
Number of successful extensions: 737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)