Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_D03
         (519 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...   124   6e-31
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    23   1.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   7.6  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score =  124 bits (299), Expect = 6e-31
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = +1

Query: 166 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGI 345
           E++PIY PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGI
Sbjct: 4   EDHPIYAPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGI 63

Query: 346 IAIY 357
           IAIY
Sbjct: 64  IAIY 67



 Score = 48.0 bits (109), Expect = 6e-08
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +2

Query: 380 IAGALQEHXXYPLYKGFIHLGAGLAVXFSG 469
           IAG L+E   Y L+KGF+HLGAGLAV FSG
Sbjct: 75  IAGGLEEPKGYTLFKGFVHLGAGLAVGFSG 104



 Score = 27.1 bits (57), Expect = 0.12
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +3

Query: 474 AAGFAIXIVGDAG 512
           AAGFAI IVGDAG
Sbjct: 106 AAGFAIGIVGDAG 118


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 164 LKIIQSTDPSLELWGRRLLSSS 229
           + I + TDP  E W RR L  S
Sbjct: 142 MTITELTDPVKEFWERRALQIS 163


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 83  VSWSECVQIVITVFGTCKYSH 145
           +SW E +QI + V    +Y H
Sbjct: 694 LSWLERIQIALDVLEGIRYLH 714


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 83  VSWSECVQIVITVFGTCKYSH 145
           +SW E +QI + V    +Y H
Sbjct: 732 LSWLERIQIALDVLEGIRYLH 752


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 201 YGGGVCYHLQR 233
           YG G+ YHL +
Sbjct: 487 YGAGIVYHLSK 497


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,043
Number of Sequences: 438
Number of extensions: 3345
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)