Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_C19
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094927-1|AAM11280.1|  375|Drosophila melanogaster RH47633p pro...    36   0.036
AE013599-2314|AAF57978.1|  503|Drosophila melanogaster CG8311-PA...    36   0.036
AY047570-1|AAK77302.1|  941|Drosophila melanogaster GH08340p pro...    29   7.2  
AE014134-2945|AAF53679.1|  941|Drosophila melanogaster CG10413-P...    29   7.2  

>AY094927-1|AAM11280.1|  375|Drosophila melanogaster RH47633p
           protein.
          Length = 375

 Score = 36.3 bits (80), Expect = 0.036
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
 Frame = +2

Query: 179 RPISSNGLWCCALLPALLISYNFLYKVSP-------LYTLVAYVAVGLFCYSILFVVFIS 337
           RP +  G W C LLP L ++   L   +P       +  L+   A G+   ++ F ++  
Sbjct: 51  RPNAGPGGWLCLLLP-LALTVRLLRHATPACKDQARMQCLLTVAAGGMALETLCFFIYAF 109

Query: 338 VSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYLYSTMLXWSLTKFPK 517
           V   +L + +    +   + ++L  ++     LT ++         Y  +  ++L  F +
Sbjct: 110 VKTGILVKCLVS--LLPGVATSLSFYLLVDTSLTFAIIVGFVMTSAYQQIYIYTLRGFQR 167

Query: 518 TYTIXEAMIVTQG 556
           ++T  EA +  QG
Sbjct: 168 SFTYGEASVFVQG 180


>AE013599-2314|AAF57978.1|  503|Drosophila melanogaster CG8311-PA
           protein.
          Length = 503

 Score = 36.3 bits (80), Expect = 0.036
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
 Frame = +2

Query: 179 RPISSNGLWCCALLPALLISYNFLYKVSP-------LYTLVAYVAVGLFCYSILFVVFIS 337
           RP +  G W C LLP L ++   L   +P       +  L+   A G+   ++ F ++  
Sbjct: 51  RPNAGPGGWLCLLLP-LALTVRLLRHATPACKDQARMQCLLTVAAGGMALETLCFFIYAF 109

Query: 338 VSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYLYSTMLXWSLTKFPK 517
           V   +L + +    +   + ++L  ++     LT ++         Y  +  ++L  F +
Sbjct: 110 VKTGILVKCLVS--LLPGVATSLSFYLLVDTSLTFAIIVGFVMTSAYQQIYIYTLRGFQR 167

Query: 518 TYTIXEAMIVTQG 556
           ++T  EA +  QG
Sbjct: 168 SFTYGEASVFVQG 180


>AY047570-1|AAK77302.1|  941|Drosophila melanogaster GH08340p
           protein.
          Length = 941

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
 Frame = +2

Query: 203 WCCALLPALLISYNFLYKVSPLYTLVAYVAVGLFCYSI----------LFVVFISVSCLV 352
           WC      L+ S+N + +++ +  +++Y+A  L C  I          LF  F   +CLV
Sbjct: 430 WCLVECILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGAPNFRPLFKFFTWHTCLV 489

Query: 353 LREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYLYS 481
                  G + + ++  ++NFI+ +  +   L   + A++L+S
Sbjct: 490 -------GLLGTLIMMFVINFIYASSCIILCL-ILVIALHLFS 524


>AE014134-2945|AAF53679.1|  941|Drosophila melanogaster CG10413-PA
           protein.
          Length = 941

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
 Frame = +2

Query: 203 WCCALLPALLISYNFLYKVSPLYTLVAYVAVGLFCYSI----------LFVVFISVSCLV 352
           WC      L+ S+N + +++ +  +++Y+A  L C  I          LF  F   +CLV
Sbjct: 430 WCLVECILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGAPNFRPLFKFFTWHTCLV 489

Query: 353 LREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYLYS 481
                  G + + ++  ++NFI+ +  +   L   + A++L+S
Sbjct: 490 -------GLLGTLIMMFVINFIYASSCIILCL-ILVIALHLFS 524


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,777,898
Number of Sequences: 53049
Number of extensions: 574017
Number of successful extensions: 1540
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)