Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_C19
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 33 0.17
AC006603-4|AAF39747.2| 379|Caenorhabditis elegans Hypothetical ... 31 0.93
Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z98853-4|CAB57905.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68116-11|CAA92176.1| 317|Caenorhabditis elegans Hypothetical p... 30 1.6
Z68114-12|CAA92163.1| 317|Caenorhabditis elegans Hypothetical p... 30 1.6
Z81062-6|CAB02949.2| 320|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF068709-5|AAC19250.2| 332|Caenorhabditis elegans Serpentine re... 29 2.1
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 29 3.8
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 29 3.8
U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 29 3.8
U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 27 8.7
AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine re... 27 8.7
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine re... 27 8.7
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 170 IGTRPISSNGLWCCALL---PALLISYNFLYKVSPLYTLVAYVAVGLFCYS-ILFVVFIS 337
IGT P+ S W C L A L+ ++ K++ + A V G C + +F +++
Sbjct: 276 IGTTPVESVNAWACTFLGMSEAPLMVAPYIEKLTD-SEIFAIVTSGFACVAGTVFTAYVA 334
Query: 338 VSCLVLREPIYGGCIASSLVSALMNFIFNTQGL 436
+ PIY + +SL+SA M+ +N G+
Sbjct: 335 LGAC----PIY--LLTASLLSAPMSLAYNNLGI 361
>AC006603-4|AAF39747.2| 379|Caenorhabditis elegans Hypothetical
protein B0524.2 protein.
Length = 379
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 293 VGLFCYSILFVVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLT 463
+G + + ++F L+ R Y GC + SLV+A+ FIFN + L +SF T
Sbjct: 105 LGSYQFGAAKMIFDHGKKLMKRVERYSGCSSGSLVAAM--FIFNPEKLVFLVSFRKT 159
>Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical
protein C51E3.6 protein.
Length = 555
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +2
Query: 287 VAVGLFCYSILFVVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTA 466
V G+F + + I + +P+ GG +ASS+ + + N Q + +LS ++
Sbjct: 378 VMAGVFLIILGLITKIGALLSTIPDPLVGGVLASSMAMVVGVAVSNLQTVDMTLSRNM-G 436
Query: 467 VYLYSTMLXWSLTKFPKTYTI 529
++ +S M + K+ K + +
Sbjct: 437 IFGFSMMFGLIVPKYFKLFPV 457
>Z98853-4|CAB57905.1| 301|Caenorhabditis elegans Hypothetical
protein R08A2.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +1
Query: 97 SFKRYTSLCMSVDYTISTKSKRWRYRNEAYLKQRVMVLCFTARIINLIQFFVQSVATLYT 276
+F Y+ C +D K K+WR L + + F A I + +F+QS +++
Sbjct: 174 NFHIYSEKCNDLDLLEIVKLKQWR------LASNLNISSFAASI--SVSYFIQSNCSIFI 225
Query: 277 SSLRSCWFILLQHTV 321
S R +FI+ +
Sbjct: 226 QSSRMQYFIIYNRCI 240
>Z68116-11|CAA92176.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.8 protein.
Length = 317
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 323 VVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYL 475
VV + ++CL+LR I ASS N +F QGLT + F T VY+
Sbjct: 195 VVIVPITCLLLRRKILKLLTASSDALYFQNRVF-LQGLTLQI-FGHTLVYV 243
>Z68114-12|CAA92163.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.8 protein.
Length = 317
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 323 VVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYL 475
VV + ++CL+LR I ASS N +F QGLT + F T VY+
Sbjct: 195 VVIVPITCLLLRRKILKLLTASSDALYFQNRVF-LQGLTLQI-FGHTLVYV 243
>Z81062-6|CAB02949.2| 320|Caenorhabditis elegans Hypothetical
protein F15A4.7 protein.
Length = 320
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 236 SYNFLYKVSPLYTLVAYVAVGLFCY-SILFVVFIS 337
+Y+ L++ + + Y++VGLFC+ S+L ++ IS
Sbjct: 17 NYDILFENAIYFVTACYLSVGLFCHISLLKIILIS 51
>AF068709-5|AAC19250.2| 332|Caenorhabditis elegans Serpentine
receptor, class t protein29 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 197 GLWCCALLPALLISYNFLYKVSPLYTLVAYVAVGLFCYSIL-FVVFISVSCLVLREPI 367
GLWCC+ + A+++ N L +S TL + G Y ++ F + + +V PI
Sbjct: 117 GLWCCSCIIAMILVMNRLLDLSK-STLSTLIFEGNRTYLVMSFTILYGLYFVVFTPPI 173
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
resistance related protein2 protein.
Length = 1525
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +1
Query: 70 NSKVLHFYNSFKRYTSLCMSVDYTISTKSK 159
N +V+HFY ++ +C+++ T++ K+K
Sbjct: 103 NFEVVHFYGDLVQFGGICLALILTVACKNK 132
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
resistance protein familyprotein 2 protein.
Length = 1525
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +1
Query: 70 NSKVLHFYNSFKRYTSLCMSVDYTISTKSK 159
N +V+HFY ++ +C+++ T++ K+K
Sbjct: 103 NFEVVHFYGDLVQFGGICLALILTVACKNK 132
>U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical
protein C27H5.6 protein.
Length = 322
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 142 ISTKSKRWRYRNEAYLKQRVMVLCFTARIINLIQFFVQSVATLYTSSLRSCWFILLQHTV 321
+S RW +RN YL +VLC ++ I F V S A+ + R C + V
Sbjct: 125 VSWYRSRWTWRNRLYLSSFGIVLC---GLLTFIAFVV-SFASPSINDDRMCAVMNSTGIV 180
Query: 322 CG-IHFC 339
G IH+C
Sbjct: 181 YGTIHYC 187
>U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical
protein K09C4.5 protein.
Length = 515
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/89 (21%), Positives = 40/89 (44%)
Frame = +1
Query: 4 FXLDLALLVNTVKICSQKRMQSNSKVLHFYNSFKRYTSLCMSVDYTISTKSKRWRYRNEA 183
F + L L + + Q +++ S+ + FY+ + C++ + K K ++
Sbjct: 199 FFMTLRLPESPKWLVRQNKIEEASRAIEFYHG----ENCCLNEVVSSYIKEKNLTQEDQI 254
Query: 184 YLKQRVMVLCFTARIINLIQFFVQSVATL 270
L+Q + VLC + + L +Q V T+
Sbjct: 255 SLRQALKVLCSVSLFLVLDSGVIQGVYTV 283
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 170 IGTRPISSNGLWCCALL---PALLISYNFLYKVSPLYTLVAYVAVGLFCYS-ILFVVFIS 337
IGT P+ S W C L A L+ ++ K++ + A V G C + +F +++
Sbjct: 296 IGTTPVESVNAWACTFLGMSEAPLMVAPYIEKLTD-SEIFAIVTSGFACVAGTVFTAYVA 354
Query: 338 VSCLVLREPIYGGCIASSLVSALMN 412
+ PIY + +SL+SA M+
Sbjct: 355 LGAC----PIY--LLTASLLSAPMS 373
>AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine
receptor, class t protein1 protein.
Length = 346
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 DLALLVNTVKICSQKRMQSNSKVLHFYNSFKRYTSLCMSVDYTISTKSKRWRYRNEAYLK 192
D AL VN + + + ++ L+FY LC + + + W Y+++ +
Sbjct: 192 DPALYVNVLHNINNPIVAISTTFLYFY--------LCYYLIFKYGYSTSMWLYKSKRQII 243
Query: 193 QRVMVLCF----TARIINLIQFF 249
+ +++CF TA I +QFF
Sbjct: 244 LQGVIICFFHAGTAIIYEFVQFF 266
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 170 IGTRPISSNGLWCCALL---PALLISYNFLYKVSPLYTLVAYVAVGLFCYS-ILFVVFIS 337
IGT P+ S W C L A L+ ++ K++ + A V G C + +F +++
Sbjct: 276 IGTTPVESVNAWACTFLGMSEAPLMVAPYIEKLTD-SEIFAIVTSGFACVAGTVFTAYVA 334
Query: 338 VSCLVLREPIYGGCIASSLVSALMN 412
+ PIY + +SL+SA M+
Sbjct: 335 LGAC----PIY--LLTASLLSAPMS 353
>AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine
receptor, class t protein2 protein.
Length = 346
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 DLALLVNTVKICSQKRMQSNSKVLHFYNSFKRYTSLCMSVDYTISTKSKRWRYRNEAYLK 192
D AL VN + + + ++ L+FY LC + + + W Y+++ +
Sbjct: 192 DPALYVNVLHNINNPIVAISTTFLYFY--------LCYYLIFKYGYSTSMWLYKSKRQII 243
Query: 193 QRVMVLCF----TARIINLIQFF 249
+ +++CF TA I +QFF
Sbjct: 244 LQGVIICFFHAGTAIIYEFVQFF 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,531,396
Number of Sequences: 27780
Number of extensions: 304877
Number of successful extensions: 868
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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