Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_B20
(630 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0710 + 31384519-31385493 35 0.046
06_03_0988 + 26642247-26642506,26642790-26642872,26643150-266432... 33 0.19
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 33 0.19
10_01_0159 - 1807806-1809386 32 0.33
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 32 0.33
07_03_0394 - 17633753-17636788 32 0.43
12_02_1235 - 27233480-27233986 31 0.75
12_02_1070 - 25814741-25815850 29 2.3
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 29 2.3
03_05_0124 + 21034963-21035181,21035618-21037466,21037485-210381... 29 2.3
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 29 3.0
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 3.0
02_02_0457 + 10503801-10507358 29 3.0
07_01_1074 - 9599465-9599545,9599632-9599690,9600070-9600143,960... 29 4.0
07_03_1673 - 28532923-28533009,28533058-28533117,28533664-285337... 28 5.3
07_03_0996 - 23197758-23198705 28 5.3
06_03_0770 - 24459973-24460093,24460370-24460923 28 5.3
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 28 5.3
12_01_0366 + 2779754-2779882,2780007-2780047,2780163-2780212,278... 28 7.0
09_06_0046 + 20467240-20467586,20467627-20468116,20468815-20469426 28 7.0
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 28 7.0
06_03_0017 - 15465831-15466043,15466091-15466249,15466664-154669... 28 7.0
04_01_0032 + 387228-387374,388775-388934,389023-389156,389375-38... 28 7.0
11_01_0439 + 3353516-3353962,3354403-3354483,3354675-3354947,335... 27 9.3
07_03_1473 + 26756338-26757583,26759067-26759472,26760867-267609... 27 9.3
06_03_0396 - 20357446-20357553,20357679-20357786,20357839-203583... 27 9.3
>01_06_0710 + 31384519-31385493
Length = 324
Score = 35.1 bits (77), Expect = 0.046
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 412 PLERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRN 549
P R +PI P VP+ +TPPL P D D +++ + R+R+R+
Sbjct: 162 PFSRAASPIPVPAP-FVPALKTTPPLLPSDTDEEKRPRSRRRRRRS 206
>06_03_0988 +
26642247-26642506,26642790-26642872,26643150-26643238,
26643478-26643551,26643783-26643833,26644512-26644588,
26644694-26645313
Length = 417
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 231 SERYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRSARQAAP 359
S Y N PY+ +A + S S+ YGG+ T+ S AP
Sbjct: 365 SNSYSGNNIPYAAAAAMTSGSALYGGSTGSNGTWVASNTSTAP 407
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 406 DRPLER-YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVXASK 567
+RP R P P +K S+AS PP P ++ + K+K+E+K +N + + K
Sbjct: 153 NRPPPRPEPMPGLKKTAAPSSSSASVPPERPRALEKKPKLKIEQKEHQNLIQSVK 207
>10_01_0159 - 1807806-1809386
Length = 526
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 511 ECPCRWVTAAACWPRSAPSGARPSRW 434
ECP +WV A AC P S P W
Sbjct: 411 ECPAKWVRAMACSPSSVPDWDSDQGW 436
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 32.3 bits (70), Expect = 0.33
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +3
Query: 285 SRSSTYGGTRNV-RATFRRSARQAAPRRGSDAART*SICRFGQAAR-AIPHSHREGRAP- 455
SRS R++ R+ R S R +P RG + R S+ R R AI + GR+P
Sbjct: 590 SRSPRKNTRRSISRSPVRLSKRSISPVRGGRSRR--SVSRSASPPRRAISPAQNHGRSPS 647
Query: 456 -----DGAERGQHAAAVTHRHGHSRK 518
DG++R + THR+ +R+
Sbjct: 648 RSPSPDGSKRVRRGRGFTHRYSFARQ 673
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 31.9 bits (69), Expect = 0.43
Identities = 32/103 (31%), Positives = 46/103 (44%)
Frame = +3
Query: 195 EARIS*VGKIDHSERYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRSARQAAPRRGSD 374
+ RIS + HS+ YP ++SR+ G R V T S R +AP + D
Sbjct: 89 KVRISGTSFVSHSDAT-PLHYPLE-KRTILSRARGELGLR-VFLTDDPSVRVSAPGQEFD 145
Query: 375 AART*SICRFGQAARAIPHSHREGRAPDGAERGQHAAAVTHRH 503
T + + AA AIP+ +E RA D + QH H+H
Sbjct: 146 FISTPTTAQEQVAANAIPNPFQETRA-DQVRQFQHLPKEQHQH 187
>12_02_1235 - 27233480-27233986
Length = 168
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +1
Query: 418 ERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERIS 597
E P P T +A P ++ D +E+ + R+R NR A + RK +
Sbjct: 29 EAAPAPSPSHPDTTAAAATDEPVMAGDDQADEERRRRLRRRISNRESARRSRARKQRHLD 88
Query: 598 KLEXKVKILK 627
+L K L+
Sbjct: 89 ELRAKASALR 98
>12_02_1070 - 25814741-25815850
Length = 369
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 403 LDRPLERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKL 528
L PL R P + DEP T TPP SP KI+L
Sbjct: 191 LSLPLLREPVSVPADEPDTTKHDKLTPP-SPSTQQLPPKIRL 231
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 306 GTRNVRATFRRSARQAAPRRGSDAART*SICRFGQAARAIPHSHR 440
G R RA RR RQ APRR A+ ++ R+G A RA S R
Sbjct: 99 GFRLRRARLRR--RQEAPRRAGGASTAAAVRRWGSARRAGRQSTR 141
>03_05_0124 +
21034963-21035181,21035618-21037466,21037485-21038194,
21038426-21038470,21038557-21038745
Length = 1003
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 112 PNLXMLGGVGNVHESLHPXLSSPDLQMLK 198
PNL +L +GN+ E +H L P LQ+LK
Sbjct: 898 PNLTILLLMGNLSEEIHNSLDFPMLQILK 926
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = -2
Query: 452 GSSFTMGVGYRSSGLSKSAYTLRPSGVTASPWCSLSSASTKGRAYISCSSVGATAGNKTX 273
GSS + G G SSG + + SG T + S + S G + S S+ G+ +G +
Sbjct: 261 GSSASSGYGGSSSGSMSGSGSSSSSGSTGMSYGSSGAGSFSGSSSGSNSNAGSMSGANSG 320
Query: 272 XXXXXXXXVTIPF*MINFSNSGDPSFNICKSG 177
+ S+SG S ++ SG
Sbjct: 321 AGSSSSAYGASGSGSNSMSDSGSSSGSVSASG 352
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 424 YPTPI-VKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISK 600
+P+P + P PS +S PP PI++ +E+ + E + V + + E + +
Sbjct: 50 WPSPQNPRSVPVQFPSPSSPPPSPPIEISDEEEAEAEVVVEEEEVVVVEDEEEEYEEVEE 109
Query: 601 LE 606
+E
Sbjct: 110 IE 111
>02_02_0457 + 10503801-10507358
Length = 1185
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 494 PSTWTLKKRLNWRERDRGIGXPLPNVXDVSWN 589
P+ + L R WR +R + LPN+ D +N
Sbjct: 61 PAKYDLIDRAEWRSHERRVAELLPNLKDAMYN 92
>07_01_1074 -
9599465-9599545,9599632-9599690,9600070-9600143,
9600797-9600996,9601074-9601365,9601665-9602411,
9602653-9602696,9602714-9602827,9603590-9603838,
9603922-9603927
Length = 621
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 355 HHGEAVTPLGRRVYADLDRPLERYP-TPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLE 531
H G +VT GRR P Y T + +D T P +A TP + I + ++ I ++
Sbjct: 11 HSGNSVTSSGRRARGPTRMPSGMYTITAVDEDGNPTSPKSALTPYSNAIGVIARDDIPIK 70
>07_03_1673 -
28532923-28533009,28533058-28533117,28533664-28533732,
28534757-28534862,28535058-28535203,28535805-28536017,
28536523-28536546,28536647-28536704,28536739-28537022,
28538890-28539063,28539427-28539825
Length = 539
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = -3
Query: 514 LECPCRWVTAAACWPRSAPSGARPSRWEWGIALAACPNRHILYVRAASLPRRGAACLA 341
L CPC +A WPR A G LAA P A S PR+ A A
Sbjct: 68 LPCPCGGNASAGVWPRGQNMEANADYVRRGFRLAAPPLPDAT-AAALSSPRQHAVTTA 124
>07_03_0996 - 23197758-23198705
Length = 315
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 295 APTEEQEMYARPFVEA-LDKLHHGEAVTPLGRRVYADLDRPLERYPTPIVKDEPQTVPSA 471
APT+ E+Y FV A ++ T G D ++ P P+ S+
Sbjct: 204 APTDASEVYRPDFVHAGAEEFDSWMFDTAFGPFPELDSFAAVDAVTPPPATASPEE--SS 261
Query: 472 ASTPPLSPIDMDTQEKIKLERK 537
A TPP ++M E+IK+ER+
Sbjct: 262 AGTPP---VEMAEFERIKVERR 280
>06_03_0770 - 24459973-24460093,24460370-24460923
Length = 224
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 442 KDEPQTVPSAAST-PPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVK 618
K + Q SA +T PP SP+ + ++K K+ K++ R+K ++ K E KV+
Sbjct: 69 KQQQQQQESAETTLPPPSPVAVLDEKKEKVTTKKRPAPAEDESMMRKKKKKKIKCEVKVE 128
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 411 AARAIPHSHREGRAPDGAERGQHAAAV 491
AA A P HR G A R +HAAAV
Sbjct: 8 AAAATPRRHRHGPATPRRRRRRHAAAV 34
>12_01_0366 +
2779754-2779882,2780007-2780047,2780163-2780212,
2780824-2780968,2781298-2781354,2781448-2781571,
2781798-2782259,2782493-2782564
Length = 359
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 397 ADLDRPLERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 525
AD RP + TP+++ P P A+ TP + + +++K+K
Sbjct: 286 ADAHRPAYGHGTPLLQPLPPPTPPASLTPVHNDEPVISRDKVK 328
>09_06_0046 + 20467240-20467586,20467627-20468116,20468815-20469426
Length = 482
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 300 YGGTRNVRATFRRSARQAAPRRGSDAART*SIC-RFGQAARAI 425
YGG RN+ +R S+ AAP R ++AA + R +AARA+
Sbjct: 111 YGG-RNISWPWRTSSPLAAPARAAEAAALVARARRAAEAARAV 152
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +1
Query: 286 PAVAPTEEQEMYARPFVEALDKLHHGEAVT----PLGRRVYADLDRPLERYPTPIVKDEP 453
P + T +Y P ++ H ++ PL ++ DL RPL P+ + E
Sbjct: 98 PPPSSTASDAIYLDPLTTLVEVRQHEKSPDLRPLPLLKQPSPDL-RPLP----PLKRPES 152
Query: 454 QTVPSAASTPPLSPIDMDTQEK 519
Q P STPPL+ T E+
Sbjct: 153 QPPPPPPSTPPLTTTGYSTDEE 174
>06_03_0017 -
15465831-15466043,15466091-15466249,15466664-15466968,
15467083-15467324,15467818-15467825,15467954-15468418,
15468465-15468763,15468968-15469204,15469297-15469519
Length = 716
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 298 PTEEQEMYARPFVEALDKLHHGEAVTPLGRRVYADLDRPLERYPTPIVKDEPQTVPSAAS 477
PT + A+ +AL L G +V+ + + ++ L+ RYP I +D P +
Sbjct: 217 PTITCSIGAQQIDQALCDL--GASVSVMPKDIFDKLNFTSVRYPAGITEDLPDKIQDFFI 274
Query: 478 TPPLSPIDMDTQEKIKL 528
+DMDT +K L
Sbjct: 275 PVDFVVLDMDTGKKTPL 291
>04_01_0032 +
387228-387374,388775-388934,389023-389156,389375-389584,
389897-390007,390848-391108
Length = 340
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -2
Query: 476 LAALGTVWGSSFTMGV--GYRSSGLSKSAYTLRPSGVTASPWCSLSSASTK 330
L ALG V S+ +GV G+ SS L A+ P + + WC +++ST+
Sbjct: 53 LRALGGVKASACLLGVPLGHNSSFLQGPAFA--PPRIREAIWCGSTNSSTE 101
>11_01_0439 +
3353516-3353962,3354403-3354483,3354675-3354947,
3355081-3355212,3355303-3355476,3355568-3355702,
3355746-3355797,3355954-3356093,3356574-3356705,
3356787-3356921,3356995-3357201,3357779-3357943
Length = 690
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 442 SRWEWGIALAACPNRHILYVRAASLPRRGAACLALRRKVARTFL 311
+R EW IAL AC + I V S GA C +L T +
Sbjct: 140 TRAEWQIALQACFRQSITVVTIYSSLGEGALCHSLNETEVTTVI 183
>07_03_1473 +
26756338-26757583,26759067-26759472,26760867-26760930,
26760975-26761055,26763350-26763588,26763689-26763947,
26764359-26764538,26764937-26765092,26765174-26765350
Length = 935
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 514 EKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
++ K + RNR A + +RK + + +LE KVK+++
Sbjct: 110 DEAKRRARLVRNRESAHQSRQRKKQYVEELEGKVKVMQ 147
>06_03_0396 -
20357446-20357553,20357679-20357786,20357839-20358381,
20358478-20358669,20358787-20359017
Length = 393
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 276 CLISRSSTYGGTRNVRATFRRSARQAAPRRGSDA 377
C RS Y RN+ A+F +Q PR G DA
Sbjct: 206 CQFFRSRIYT-ERNINASFASLRQQTCPRSGGDA 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,673,645
Number of Sequences: 37544
Number of extensions: 379131
Number of successful extensions: 1557
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1553
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -