Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_B20
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 35 0.055
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 35 0.055
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 35 0.055
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 35 0.055
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 33 0.13
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 31 0.51
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 31 0.51
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 31 0.51
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 31 0.51
AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical... 30 1.6
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 29 2.1
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 29 2.1
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 29 2.1
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 29 2.1
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 29 2.1
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 29 2.1
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 29 2.1
AF016681-6|AAB66175.2| 317|Caenorhabditis elegans Hypothetical ... 29 2.1
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 29 2.1
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 29 2.1
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical p... 29 3.6
Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 29 3.6
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 29 3.6
AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding... 29 3.6
AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding... 29 3.6
AF077542-6|AAC26298.1| 108|Caenorhabditis elegans Hypothetical ... 29 3.6
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 28 4.8
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 28 4.8
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 28 4.8
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 28 4.8
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 28 4.8
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 28 4.8
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 27 8.4
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +1
Query: 484 PLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKV 615
P++ + +D QEK KLERKR RNR A+KC ++K++RI +LE +V
Sbjct: 69 PINMMALDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 112
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +1
Query: 502 MDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKV 615
+D QEK KLERKR RNR A+KC ++K++RI +LE +V
Sbjct: 21 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 58
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +1
Query: 502 MDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKV 615
+D QEK KLERKR RNR A+KC ++K++RI +LE +V
Sbjct: 219 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 256
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +1
Query: 502 MDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKV 615
+D QEK KLERKR RNR A+KC ++K++RI +LE +V
Sbjct: 239 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 276
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 466 SAASTPPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
S+A P +M+ + K ++RQRN+ A++C +R+++ + +L+ +V K
Sbjct: 10 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQVNDFK 63
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 466 SAASTPPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
S+A P +M+ + K ++RQRN+ A++C +R+++ + +L+ +V K
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQVNDFK 199
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 466 SAASTPPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
S+A P +M+ + K ++RQRN+ A++C +R+++ + +L+ +V K
Sbjct: 10 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQVNDFK 63
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 466 SAASTPPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
S+A P +M+ + K ++RQRN+ A++C +R+++ + +L+ +V K
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQVNDFK 199
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 376 PLGRRVY---ADLDRPLERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 546
PL RR A + RP + P P + P P A TPP++ + Q+K+K++ +
Sbjct: 375 PLPRRYQGPPAQVLRPPQMGPPPGINQVPYQ-PKANRTPPMTSQQLHEQQKLKMQEEEMM 433
Query: 547 NRVXASKCXRRKLE 588
++ AS R ++
Sbjct: 434 SQTCASDFRVRPID 447
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 514 EKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
EK KLERK+++NR A C + + +L+ +++L+
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 299
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 514 EKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
EK KLERK+++NR A C + + +L+ +++L+
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 316
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 514 EKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
EK KLERK+++NR A C + + +L+ +++L+
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 316
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 514 EKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
EK KLERK+++NR A C + + +L+ +++L+
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLEMLR 299
>AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical
protein Y73F8A.35 protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 319 YARPFVEALDKLHHGEAVT 375
Y RPF AL++ HHGE +T
Sbjct: 314 YMRPFQNALERPHHGEFIT 332
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 436 IVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNR 552
+ D+P T S+A PP SPI ++T E +E ++++ +
Sbjct: 22 VADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKK 58
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 436 IVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNR 552
+ D+P T S+A PP SPI ++T E +E ++++ +
Sbjct: 22 VADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKK 58
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 493 PIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
P+ + + K + + +NR A +C R+K E + LE +V +L+
Sbjct: 237 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLE 281
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 493 PIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
P+ + + K + + +NR A +C R+K E + LE +V +L+
Sbjct: 262 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLE 306
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 493 PIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
P+ + + K + + +NR A +C R+K E + LE +V +L+
Sbjct: 245 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLE 289
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 493 PIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
P+ + + K + + +NR A +C R+K E + LE +V +L+
Sbjct: 258 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLE 302
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 493 PIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
P+ + + K + + +NR A +C R+K E + LE +V +L+
Sbjct: 256 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLE 300
>AF016681-6|AAB66175.2| 317|Caenorhabditis elegans Hypothetical
protein F22E5.11 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 364 EAVTPLGRRVYADLDRPLERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQE 516
EA+ LGR L +E+ TP +P T S ++ PL P D E
Sbjct: 189 EAIARLGREPIPVLPSKIEKTATPPTIGDPVTSSSDSTESPLIPEQPDNNE 239
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 493 PIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
P+ + + K + + +NR A +C R+K E + LE +V +L+
Sbjct: 256 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLE 300
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 493 PIDMDTQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKILK 627
P+ + + K + + +NR A +C R+K E + LE +V +L+
Sbjct: 237 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLE 281
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 37 GHSMETTFYDEQYPLSGPXGKP*KAPNLXMLGGVG------NVHESLHPXLSSPDLQMLK 198
GH++ ++ P P A + +GG+G N +++ + +P Q L
Sbjct: 71 GHTVHLVIRNQARPTPAPAAATPTASSAPTMGGMGSPADILNNPDAMRSVMDNPITQQL- 129
Query: 199 LGSPELEKLIIQN 237
LG+PE + IIQ+
Sbjct: 130 LGNPEFMRTIIQS 142
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 37 GHSMETTFYDEQYPLSGPXGKP*KAPNLXMLGGVG------NVHESLHPXLSSPDLQMLK 198
GH++ ++ P P A + +GG+G N +++ + +P Q L
Sbjct: 71 GHTVHLVIRNQARPTPAPAAATPTASSAPTMGGMGSPADILNNPDAMRSVMDNPITQQL- 129
Query: 199 LGSPELEKLIIQN 237
LG+PE + IIQ+
Sbjct: 130 LGNPEFMRTIIQS 142
>Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical
protein R74.3b protein.
Length = 287
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 508 TQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKIL 624
+QE+ K++R++ +NRV A +K ER +K+E ++ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDL 96
>Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical
protein R74.3a protein.
Length = 335
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 508 TQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKIL 624
+QE+ K++R++ +NRV A +K ER +K+E ++ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDL 96
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 443 FTMGVGYRSSGLSKSAYTLRPSGVTASPW 357
F GVGY S Y LR +G ++PW
Sbjct: 56 FKDGVGYNLDSQQGSTYNLRKNGGPSNPW 84
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 415 LERYPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVXASKCXRRKLERI 594
L+ T + DE V S+PP SP+++++ EKI E QR S + E +
Sbjct: 703 LQAVETEVQSDE-LFVDGPPSSPPPSPVNIESMEKINKESIFQRANSVLSGSKMSETEYV 761
Query: 595 SKL 603
++
Sbjct: 762 KEI 764
>AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding
protein processedisoform protein.
Length = 285
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 508 TQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKIL 624
+QE+ K++R++ +NRV A +K ER +K+E ++ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDL 96
>AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding
protein unprocessedisoform protein.
Length = 287
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 508 TQEKIKLERKRQRNRVXASKCXRRKLERISKLEXKVKIL 624
+QE+ K++R++ +NRV A +K ER +K+E ++ L
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDL 96
>AF077542-6|AAC26298.1| 108|Caenorhabditis elegans Hypothetical
protein Y57G7A.3a protein.
Length = 108
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 427 PTPIVKDEPQTVPSAASTPPLSPIDMDTQE 516
P PI K QT P+A + P +PI+ E
Sbjct: 51 PNPIKKSSTQTCPTAQTPPAKTPIERSRHE 80
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 412 PLERYPTPIVKDEPQTVPSAASTP 483
P E P P+V +E +PS A+TP
Sbjct: 429 PEEGNPVPVVSEEEGKIPSVATTP 452
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 412 PLERYPTPIVKDEPQTVPSAASTP 483
P E P P+V +E +PS A+TP
Sbjct: 182 PEEGNPVPVVSEEEGKIPSVATTP 205
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 412 PLERYPTPIVKDEPQTVPSAASTP 483
P E P P+V +E +PS A+TP
Sbjct: 429 PEEGNPVPVVSEEEGKIPSVATTP 452
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 412 PLERYPTPIVKDEPQTVPSAASTP 483
P E P P+V +E +PS A+TP
Sbjct: 429 PEEGNPVPVVSEEEGKIPSVATTP 452
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 412 PLERYPTPIVKDEPQTVPSAASTP 483
P E P P+V +E +PS A+TP
Sbjct: 433 PEEGNPVPVVSEEEGKIPSVATTP 456
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 412 PLERYPTPIVKDEPQTVPSAASTP 483
P E P P+V +E +PS A+TP
Sbjct: 433 PEEGNPVPVVSEEEGKIPSVATTP 456
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 270 SACLISRSSTYGGTRNV 320
S CL S SSTYGG RN+
Sbjct: 7 SHCLKSSSSTYGGIRNI 23
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = +3
Query: 357 PRRGSDAART*SICRFGQAARAIPHSHREGRAPDGAERGQHAAAVTHRHGHSRK 518
P R + + T R + R H HR+ + + H HRH H R+
Sbjct: 121 PERSGEGSSTEQRDRDHRQHRPTSHHHRDHKDHHRRDDKHHHRDSNHRHAHKRR 174
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 364 EAVTPLGRRVYADLDRPLERYPTPIVKDEPQTVPSAASTPP 486
E VTP A D P+E+ P + P P+ A+ P
Sbjct: 490 EQVTPAPAAAPAPADAPVEQAPVAVPAPAPAAAPAPAAPAP 530
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,816,656
Number of Sequences: 27780
Number of extensions: 279466
Number of successful extensions: 939
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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