Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_B13
         (504 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0368 + 2739908-2740320,2740437-2740816,2740893-2740977,274...    28   3.7  
01_01_0536 - 3926450-3928447                                           27   6.5  
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...    27   8.6  

>07_01_0368 +
           2739908-2740320,2740437-2740816,2740893-2740977,
           2741053-2741167,2741493-2741615
          Length = 371

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = -2

Query: 197 DNRRSLDTYIRNCCSRNQSRSVEVLPELQXRTANRMNSFANILSSFQS 54
           D +R L+ + R+  S+ +    E+L ELQ  +A +MN+     SSFQS
Sbjct: 92  DGKRRLEEWTRSVDSQLE----EILTELQQLSAAQMNAVKVSTSSFQS 135


>01_01_0536 - 3926450-3928447
          Length = 665

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 262 AEVVWRGSIATVRSIGQGTVSGITDVAWIRISVIVVAVTRVDLLRSC 122
           A V+W   I+     G+  +S  + V  +R S +  AVT V +L +C
Sbjct: 125 APVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSAC 171


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 209 DCIRDNRRSLDTYIRNCC-SRNQSRSVEVLPELQXRTANRMNS 84
           DC++  RR L+ +   CC SRN     +V   L   T + M +
Sbjct: 128 DCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGT 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,783,640
Number of Sequences: 37544
Number of extensions: 151130
Number of successful extensions: 421
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)