Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_B13
(504 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032365-1|AAH32365.1| 860|Homo sapiens SH2 domain containing 3... 29 9.2
BC027962-1|AAH27962.1| 703|Homo sapiens SH2D3C protein protein. 29 9.2
AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein. 29 9.2
AY358089-1|AAQ88456.1| 688|Homo sapiens NSP3 protein. 29 9.2
AL162586-7|CAI39766.1| 860|Homo sapiens SH2 domain containing 3... 29 9.2
AL162586-4|CAI39763.1| 703|Homo sapiens SH2 domain containing 3... 29 9.2
AL162586-3|CAI39762.1| 324|Homo sapiens SH2 domain containing 3... 29 9.2
AL162586-2|CAI39761.1| 702|Homo sapiens SH2 domain containing 3... 29 9.2
AL162586-1|CAI39760.1| 196|Homo sapiens SH2 domain containing 3... 29 9.2
AL162426-7|CAI41182.1| 860|Homo sapiens SH2 domain containing 3... 29 9.2
AL162426-4|CAI41179.1| 703|Homo sapiens SH2 domain containing 3... 29 9.2
AL162426-3|CAI41178.1| 324|Homo sapiens SH2 domain containing 3... 29 9.2
AL162426-2|CAI41177.1| 702|Homo sapiens SH2 domain containing 3... 29 9.2
AL162426-1|CAI41176.1| 196|Homo sapiens SH2 domain containing 3... 29 9.2
AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein ... 29 9.2
>BC032365-1|AAH32365.1| 860|Homo sapiens SH2 domain containing 3C
protein.
Length = 860
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 223 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 262
>BC027962-1|AAH27962.1| 703|Homo sapiens SH2D3C protein protein.
Length = 703
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 66 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 105
>AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein.
Length = 703
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 66 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 105
>AY358089-1|AAQ88456.1| 688|Homo sapiens NSP3 protein.
Length = 688
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 51 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 90
>AL162586-7|CAI39766.1| 860|Homo sapiens SH2 domain containing 3C
protein.
Length = 860
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 223 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 262
>AL162586-4|CAI39763.1| 703|Homo sapiens SH2 domain containing 3C
protein.
Length = 703
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 66 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 105
>AL162586-3|CAI39762.1| 324|Homo sapiens SH2 domain containing 3C
protein.
Length = 324
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 59 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 98
>AL162586-2|CAI39761.1| 702|Homo sapiens SH2 domain containing 3C
protein.
Length = 702
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 65 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 104
>AL162586-1|CAI39760.1| 196|Homo sapiens SH2 domain containing 3C
protein.
Length = 196
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 40 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 79
>AL162426-7|CAI41182.1| 860|Homo sapiens SH2 domain containing 3C
protein.
Length = 860
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 223 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 262
>AL162426-4|CAI41179.1| 703|Homo sapiens SH2 domain containing 3C
protein.
Length = 703
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 66 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 105
>AL162426-3|CAI41178.1| 324|Homo sapiens SH2 domain containing 3C
protein.
Length = 324
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 59 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 98
>AL162426-2|CAI41177.1| 702|Homo sapiens SH2 domain containing 3C
protein.
Length = 702
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 65 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 104
>AL162426-1|CAI41176.1| 196|Homo sapiens SH2 domain containing 3C
protein.
Length = 196
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 40 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 79
>AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein
Nsp3 protein.
Length = 703
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 257 GCMERQHSHRTIHRPGD-CIRDNRRSLDTYIRNCCSRNQS 141
G + R+ S + R GD IRD+ SL Y+ C RNQ+
Sbjct: 66 GRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQA 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,537,813
Number of Sequences: 237096
Number of extensions: 890576
Number of successful extensions: 2200
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2200
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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