Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_B07
         (456 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    68   4e-12
11_01_0483 - 3718104-3718802,3718817-3719308                           31   0.44 
11_01_0340 + 2534998-2535660                                           28   3.1  
11_01_0674 - 5502275-5502954,5503054-5504746                           27   7.2  
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580...    27   9.5  
01_06_1007 - 33733500-33733604,33733837-33733917,33734191-337342...    27   9.5  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 67.7 bits (158), Expect = 4e-12
 Identities = 38/95 (40%), Positives = 47/95 (49%)
 Frame = +1

Query: 136 DDDVAVTGXKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXX 315
           DD + +T  KI+T++KAA + VE YWPGLFAK LE  +V DLI ++GSG           
Sbjct: 17  DDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLILSVGSG-GGAAPVAAAA 75

Query: 316 XXXXXXXXXXEEXXXXXXXXXXXXSDDDMGFGLFD 420
                                   SDDDMGF LFD
Sbjct: 76  APAAGGGAAAAPAAEEKKEEAKEESDDDMGFSLFD 110


>11_01_0483 - 3718104-3718802,3718817-3719308
          Length = 396

 Score = 31.1 bits (67), Expect = 0.44
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 47  LRPTATCTFKTKNGVKS*ISMCLLCSHPGWMMMLP 151
           LRP AT T    +GV    +      +PGW+M++P
Sbjct: 4   LRPVATATATLPSGVPPPAAAAAARGYPGWVMLMP 38


>11_01_0340 + 2534998-2535660
          Length = 220

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 242 PSKALANRPGQYGSTXTAAAFKMVEIXSPVTATSSSSQDESRVNTC 105
           P+ + ++     GS   AAA +  E  SP +++SSS     R ++C
Sbjct: 58  PTSSSSSSSSSTGSASRAAACERKEPGSPASSSSSSGGKPGRADSC 103


>11_01_0674 - 5502275-5502954,5503054-5504746
          Length = 790

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 371 RRNPXSPTMTWASVSLTNXL 430
           RR+P    +TW+SV LTN L
Sbjct: 222 RRDPYIEYLTWSSVQLTNML 241


>03_05_0725 + 27155736-27155746,27155798-27155949,27156108-27158068,
            27159169-27159397,27159506-27159634,27159725-27159838,
            27160059-27160258,27160301-27160599,27160713-27160923,
            27161017-27161172,27161290-27161447,27161532-27161724,
            27162015-27162406,27162537-27162717,27162802-27163031,
            27163108-27163753,27163833-27163902,27163994-27164244
          Length = 1860

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -2

Query: 284  TPEPMLVIRSRTLMPSKALANRPGQYGSTXTAAAFKMVEIXSPVTATSSSSQDESRVN 111
            TP P   I         A+A+ P +   T  AAA   +   S   A  S+ QD  R N
Sbjct: 1799 TPAPAAAIAPSQQEAGVAVASSPHEAQKTAAAAAASQLTRSSSSRAMESTGQDGGRGN 1856


>01_06_1007 -
           33733500-33733604,33733837-33733917,33734191-33734238,
           33734364-33734549,33735148-33735678,33735823-33735864,
           33735945-33736065,33736200-33736281,33737169-33737227,
           33738492-33738564,33738694-33738913
          Length = 515

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 218 VCSPKPWKASMSVT*SPTSALEWVLLRPLV 307
           VC  +P         SP  +L WVLLRP++
Sbjct: 482 VCKLRPTALLADGVASPLRSLAWVLLRPIM 511


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,255,657
Number of Sequences: 37544
Number of extensions: 178139
Number of successful extensions: 427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)