Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_B07
(456 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 107 5e-24
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 107 5e-24
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 107 5e-24
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 105 3e-23
BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro... 30 1.3
AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,... 30 1.3
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 28 5.2
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,... 27 9.1
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 107 bits (258), Expect = 5e-24
Identities = 56/96 (58%), Positives = 60/96 (62%)
Frame = +1
Query: 133 LDDDVAVTGXKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXX 312
+DDDVAVTG KI+TILKAA V VEPYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76
Query: 313 XXXXXXXXXXXEEXXXXXXXXXXXXSDDDMGFGLFD 420
+ SDDDMGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 84 MVSKAELACVYSALIL 131
M +KAELACVY++LIL
Sbjct: 1 MSTKAELACVYASLIL 16
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 107 bits (258), Expect = 5e-24
Identities = 56/96 (58%), Positives = 60/96 (62%)
Frame = +1
Query: 133 LDDDVAVTGXKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXX 312
+DDDVAVTG KI+TILKAA V VEPYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76
Query: 313 XXXXXXXXXXXEEXXXXXXXXXXXXSDDDMGFGLFD 420
+ SDDDMGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 84 MVSKAELACVYSALIL 131
M +KAELACVY++LIL
Sbjct: 1 MSTKAELACVYASLIL 16
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 107 bits (258), Expect = 5e-24
Identities = 56/96 (58%), Positives = 60/96 (62%)
Frame = +1
Query: 133 LDDDVAVTGXKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXX 312
+DDDVAVTG KI+TILKAA V VEPYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76
Query: 313 XXXXXXXXXXXEEXXXXXXXXXXXXSDDDMGFGLFD 420
+ SDDDMGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 84 MVSKAELACVYSALIL 131
M +KAELACVY++LIL
Sbjct: 1 MSTKAELACVYASLIL 16
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 105 bits (252), Expect = 3e-23
Identities = 55/96 (57%), Positives = 59/96 (61%)
Frame = +1
Query: 133 LDDDVAVTGXKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXX 312
+DDDVAVTG KI+TILKAA V VEPYWPGLFAKALE INV+DLITNIGSGV
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAA 76
Query: 313 XXXXXXXXXXXEEXXXXXXXXXXXXSDDDMGFGLFD 420
+ SDDDMGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p
protein.
Length = 1031
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 11 SSELKRACSLLQLRPTATCTFKTKNGVK-S*ISMCLLCSHPGW 136
S++ R C+ L+ P T KNG K S ++ LC+ PGW
Sbjct: 386 SAQCTRPCTFLRYGPNCELTCNCKNGAKCSPVNGTCLCA-PGW 427
>AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,
isoform B protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 11 SSELKRACSLLQLRPTATCTFKTKNGVK-S*ISMCLLCSHPGW 136
S++ R C+ L+ P T KNG K S ++ LC+ PGW
Sbjct: 244 SAQCTRPCTFLRYGPNCELTCNCKNGAKCSPVNGTCLCA-PGW 285
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 266 VIRSRTLMPSKALANRPGQYGSTXTAAAFKMVEI 165
+I S+ L+P+K N P QY T A K +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
isoform B protein.
Length = 2833
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 214 ANMALHXQPPLSRWWKFXHQLRQHHH 137
AN A+H P H+ RQHHH
Sbjct: 1835 ANPAMHFVSPFKSLENLLHEDRQHHH 1860
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,632,998
Number of Sequences: 53049
Number of extensions: 287855
Number of successful extensions: 699
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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