Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_B02
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin pr...   150   7e-37
AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin ...   150   7e-37
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    80   2e-15

>X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin
           protein.
          Length = 395

 Score =  150 bits (364), Expect = 7e-37
 Identities = 66/106 (62%), Positives = 79/106 (74%)
 Frame = +3

Query: 327 VVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGPDICGPXTKKVHVIFXYK 506
           V+Q+TVKHEQ IDCGGGY+KV     +  D HGETPY +MFGPDICGP T++VHVI  YK
Sbjct: 88  VIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-TRRVHVILNYK 146

Query: 507 GKNHLIKKDIRCXDDVYTHLYTLIVKPDNTYEVLIDNXKVESGDLK 644
           G+N LIKK+I C  D  THLYTLI+  DNTYEV ID    ++G L+
Sbjct: 147 GENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLE 192



 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 101 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 280
           ++ +V+F+E+F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 281 LSRKF-KPFSNEGKPL 325
            + KF K FSN+GK L
Sbjct: 72  RAAKFDKDFSNKGKTL 87


>AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin
           protein 1 protein.
          Length = 395

 Score =  150 bits (364), Expect = 7e-37
 Identities = 66/106 (62%), Positives = 79/106 (74%)
 Frame = +3

Query: 327 VVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGETPYEIMFGPDICGPXTKKVHVIFXYK 506
           V+Q+TVKHEQ IDCGGGY+KV     +  D HGETPY +MFGPDICGP T++VHVI  YK
Sbjct: 88  VIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-TRRVHVILNYK 146

Query: 507 GKNHLIKKDIRCXDDVYTHLYTLIVKPDNTYEVLIDNXKVESGDLK 644
           G+N LIKK+I C  D  THLYTLI+  DNTYEV ID    ++G L+
Sbjct: 147 GENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLE 192



 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 101 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 280
           ++ +V+F+E+F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 281 LSRKF-KPFSNEGKPL 325
            + KF K FSN+GK L
Sbjct: 72  RAAKFDKDFSNKGKTL 87


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 47/120 (39%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
 Frame = +3

Query: 318 NPWVVQFTVKHEQDIDCGGGYLKVFD--CKLEXKDMHGETPYEIMFGPDICGPXTKKVHV 491
           N +VVQ+ +K E+  +CGGGYLK+     + +  +   +T Y IMFGPD CG  T KVH+
Sbjct: 136 NTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-ATGKVHL 194

Query: 492 IFXYKGK-NHLIKK---------DIRCXDDVYTHLYTLIVKPDNTYEVLIDNXKVESGDL 641
           IF YK   N  I +              DD  THL+TL+VKP   Y V +D   +  G++
Sbjct: 195 IFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNM 254


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,365,496
Number of Sequences: 27780
Number of extensions: 330590
Number of successful extensions: 907
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)