Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_B01
(400 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 169 1e-43
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 169 1e-43
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 169 1e-43
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 92 3e-20
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 84 9e-18
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 58 4e-10
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 44 1e-05
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 38 4e-04
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 30 0.12
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 30 0.12
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 30 0.15
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.15
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 0.81
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 27 1.1
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 26 1.9
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 1.9
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 3.3
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 4.3
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.7
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 24 10.0
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 24 10.0
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 24 10.0
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 169 bits (411), Expect = 1e-43
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
IYKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY V
Sbjct: 28 IYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNV 87
Query: 329 TIIDAPGHRDFIKNMITGTSXADC 400
T+IDAPGHRDFIKNMITGTS ADC
Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADC 111
Score = 57.6 bits (133), Expect = 7e-10
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HIN+VVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 169 bits (411), Expect = 1e-43
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
IYKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY V
Sbjct: 28 IYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNV 87
Query: 329 TIIDAPGHRDFIKNMITGTSXADC 400
T+IDAPGHRDFIKNMITGTS ADC
Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADC 111
Score = 57.6 bits (133), Expect = 7e-10
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HIN+VVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 169 bits (411), Expect = 1e-43
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
IYKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY V
Sbjct: 28 IYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNV 87
Query: 329 TIIDAPGHRDFIKNMITGTSXADC 400
T+IDAPGHRDFIKNMITGTS ADC
Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADC 111
Score = 57.6 bits (133), Expect = 7e-10
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HIN+VVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 91.9 bits (218), Expect = 3e-20
Identities = 42/83 (50%), Positives = 54/83 (65%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
+++ G I+ R++ K EA GKGSF YAW+LD + ER RG+T+D+A FE+ K
Sbjct: 198 MFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIY 257
Query: 329 TIIDAPGHRDFIKNMITGTSXAD 397
I DAPGHRDFI MI G S AD
Sbjct: 258 EIGDAPGHRDFISGMIAGASSAD 280
Score = 32.3 bits (70), Expect = 0.029
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 79 KTHINIVVIGHVDSGKSTTTGHLHLQM 159
K +++VV GHVDSGKST G + ++
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFEL 201
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 83.8 bits (198), Expect = 9e-18
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
++ G +DKRT+ K E+EA+E GK S+ +W LD ERE+G T+++ FET
Sbjct: 259 LFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRF 318
Query: 329 TIIDAPGHRDFIKNMITGTSXAD 397
+++DAPGH+ ++ NMI G S AD
Sbjct: 319 SLLDAPGHKGYVTNMINGASQAD 341
Score = 37.5 bits (83), Expect = 8e-04
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 79 KTHINIVVIGHVDSGKSTTTGHL 147
K H+NIV IGHVD+GKST G++
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNI 258
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 58.4 bits (135), Expect = 4e-10
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +2
Query: 209 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 388
++G+ SF +DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG +
Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138
Query: 389 XAD 397
D
Sbjct: 139 TMD 141
Score = 33.5 bits (73), Expect = 0.012
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 73 KEKTHINIVVIGHVDSGKSTTT 138
++K H+NI IGHVD GK+T T
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLT 70
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 43.6 bits (98), Expect = 1e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 242 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 361
V+D L AER+RGITI+ A F + +ID PGH DF
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADF 106
Score = 25.0 bits (52), Expect = 4.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 91 NIVVIGHVDSGKSTTT 138
N+ +I H+D+GK+T T
Sbjct: 30 NVGIIAHIDAGKTTLT 45
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 38.3 bits (85), Expect = 4e-04
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 245 LDKLKAERERGITIDI----ALWKFETSKYYVTIIDAPGHRDF 361
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDF 137
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 30.3 bits (65), Expect = 0.12
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGK N+ VI HVD GKST T L
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSL 39
Score = 24.2 bits (50), Expect = 7.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 320 YYVTIIDAPGHRDFIKNMITGTSXAD 397
+ V +ID+PGH DF + D
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTD 123
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 30.3 bits (65), Expect = 0.12
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGK N+ VI HVD GKST T L
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSL 39
Score = 24.2 bits (50), Expect = 7.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 320 YYVTIIDAPGHRDFIKNMITGTSXAD 397
+ V +ID+PGH DF + D
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTD 123
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.9 bits (64), Expect = 0.15
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 285 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMVRLSIPPH 157
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 248 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 370
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 0.81
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 309 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMV 178
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.1 bits (57), Expect = 1.1
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 215 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 388
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 389 XAD 397
AD
Sbjct: 243 IAD 245
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 26.2 bits (55), Expect = 1.9
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 19/58 (32%)
Frame = +2
Query: 245 LDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDF 361
+D ++ ERE+GITI A W+ FE S Y + IID PGH DF
Sbjct: 102 MDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDF 158
Score = 23.8 bits (49), Expect = 10.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 91 NIVVIGHVDSGKSTTT 138
NI + H+DSGK+T T
Sbjct: 61 NIGISAHIDSGKTTFT 76
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 26.2 bits (55), Expect = 1.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 320 YYVTIIDAPGHRDFIKNMITGTSXAD 397
Y + +ID+PGH DF + + + D
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCD 119
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.4 bits (53), Expect = 3.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 209 PGPPSRTXRWYVCQYHHIC 153
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 4.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 61 PKMGKEKTHINIVVIGHVDSGKST 132
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
Score = 24.2 bits (50), Expect = 7.6
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 323 YVTIIDAPGHRDFIKNMITGTSXAD 397
+V+ +D PGH + M+ G + D
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMD 133
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 5.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 379 CDHVLDEISVSRSINDGNIVLASFEL 302
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 23.8 bits (49), Expect = 10.0
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = +1
Query: 73 KEKTHINIVVIGHVDSGKST----TTGHLH 150
KEK I+V+G SGK+T HLH
Sbjct: 4 KEKKPCAIIVVGMAGSGKTTFMQQLNAHLH 33
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 23.8 bits (49), Expect = 10.0
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 303 FQRAISIVIPRSRS--AFSLSNTQAYLKDPLPISWASFSNXSMVRLSI 166
F R I IP+S S AFS SN A P P +S ++ S + SI
Sbjct: 58 FLRESKIQIPKSSSSTAFSPSNNNA--PSPFPPKNSSLASPSKISESI 103
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 23.8 bits (49), Expect = 10.0
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 275 HAHAQPLVCPIPKHI*RILYPFPGPPSRTXRWY 177
H+H PL P+P +L P P P WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,549,787
Number of Sequences: 5004
Number of extensions: 27906
Number of successful extensions: 97
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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