Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_B01
(400 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 177 2e-45
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 177 2e-45
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 177 2e-45
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 177 2e-45
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 88 3e-18
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 82 2e-16
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 54 5e-08
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 54 5e-08
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 52 2e-07
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 52 2e-07
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 52 2e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 39 0.001
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.6
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 28 2.1
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 2.1
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 2.1
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 28 2.8
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 28 2.8
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 27 3.7
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 27 3.7
Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 26 8.7
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 26 8.7
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 177 bits (431), Expect = 2e-45
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
IYKCGGIDKRTI KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 329 TIIDAPGHRDFIKNMITGTSXADC 400
TIIDAPGHRDFIKNMITGTS ADC
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADC 111
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 177 bits (431), Expect = 2e-45
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
IYKCGGIDKRTI KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 329 TIIDAPGHRDFIKNMITGTSXADC 400
TIIDAPGHRDFIKNMITGTS ADC
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADC 111
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 177 bits (431), Expect = 2e-45
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
IYKCGGIDKRTI KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 329 TIIDAPGHRDFIKNMITGTSXADC 400
TIIDAPGHRDFIKNMITGTS ADC
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADC 111
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 177 bits (431), Expect = 2e-45
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
IYKCGGIDKRTI KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYI 87
Query: 329 TIIDAPGHRDFIKNMITGTSXADC 400
TIIDAPGHRDFIKNMITGTS ADC
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQADC 111
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 105 bits (251), Expect = 2e-23
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = +2
Query: 167 IDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP 346
+D RTI KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAP
Sbjct: 197 VDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAP 256
Query: 347 GHRDFIKNMITGTSXAD 397
GH+DFI NMITGTS AD
Sbjct: 257 GHKDFISNMITGTSQAD 273
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 76 EKTHINIVVIGHVDSGKSTTTGHL 147
+K IN++V+GHVD+GKST GHL
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHL 190
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 105 bits (251), Expect = 2e-23
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = +2
Query: 167 IDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP 346
+D RTI KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAP
Sbjct: 215 VDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAP 274
Query: 347 GHRDFIKNMITGTSXAD 397
GH+DFI NMITGTS AD
Sbjct: 275 GHKDFISNMITGTSQAD 291
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 76 EKTHINIVVIGHVDSGKSTTTGHL 147
+K IN++V+GHVD+GKST GHL
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHL 208
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 87.8 bits (208), Expect = 3e-18
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYV 328
++ G +DKRT+ K+E+EA+E G+ S+ +W +D ERE+G T+++ FET K +
Sbjct: 130 MFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHF 189
Query: 329 TIIDAPGHRDFIKNMITGTSXAD 397
TI+DAPGH+ F+ NMI G + AD
Sbjct: 190 TILDAPGHKSFVPNMIVGANQAD 212
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1
Query: 70 GKEKTHINIVVIGHVDSGKSTTTGHL 147
G K HIN+V +GHVD+GKST G L
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQL 129
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 149 IYKCGGIDKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAER 268
IYKCGGIDKRTI KFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 53.6 bits (123), Expect = 5e-08
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXAD 397
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTS D
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMD 133
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 79 KTHINIVVIGHVDSGKSTTT 138
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 53.6 bits (123), Expect = 5e-08
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXAD 397
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTS D
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMD 133
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 79 KTHINIVVIGHVDSGKSTTT 138
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 388
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 134
Score = 33.1 bits (72), Expect = 0.075
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 73 KEKTHINIVVIGHVDSGKSTTT 138
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 388
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 135
Score = 33.1 bits (72), Expect = 0.075
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 73 KEKTHINIVVIGHVDSGKSTTT 138
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 388
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 135
Score = 33.1 bits (72), Expect = 0.075
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 73 KEKTHINIVVIGHVDSGKSTTT 138
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 242 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 361
+LDKL+ ERERGIT+ Y + +ID PGH DF
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 242 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 361
V D L ERERGIT+ A + + + +ID PGH DF
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 91 NIVVIGHVDSGKSTTTGHL 147
NI VI HVD+GK+T T L
Sbjct: 27 NIGVIAHVDAGKTTVTERL 45
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.1 bits (77), Expect = 0.019
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 361
+D + ER+RGITI A + + IID PGH DF
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDF 125
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 88 INIVVIGHVDSGKSTTT 138
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 88 INIVVIGHVDSGKSTTT 138
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 361
+D + E+ RGIT+ + + +ID+PGH DF
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 245 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 361
+D + E+ RGIT+ + + +ID+PGH DF
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 170 DKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERE 271
+KR + EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 170 DKRTIXKFEKEAQEMGKGSFKYAWVLDKLKAERE 271
+KR + EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 28.3 bits (60), Expect = 2.1
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 215 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSX 391
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 392 AD 397
AD
Sbjct: 228 AD 229
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 248 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXAD 397
D L E++RG +I I + Y + IID PGH +F M AD
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLAD 226
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 248 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXAD 397
D L E++RG +I I + Y + IID PGH +F M AD
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLAD 101
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
M +++ N+ VI HVD GKST T L
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGHL 147
M +++ N+ VI HVD GKST T L
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 61 PKMGKEKTHINIVVIGHVDSGKSTTTGHL 147
P K+ + V+G+VD+GKST G L
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 61 PKMGKEKTHINIVVIGHVDSGKSTTTGHL 147
P K+ + V+G+VD+GKST G L
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical
protein F11A5.9 protein.
Length = 537
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 211 FLGLLLELXDGTFVNTTTFVDASDQWWW 128
FL L L VN D D+WWW
Sbjct: 447 FLNCLAALLAPVIVNIFVANDTWDEWWW 474
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 326 VTIIDAPGHRDFI--KNMITGTSXA 394
V IID+ G RDFI KN+ GT+ A
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADA 97
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 140 VTCIYKCGGIDKRTIXKFEKEAQEMGKG 223
+ CIY+ GG+D + FEK+ ++ +G
Sbjct: 817 IECIYRGGGLDPK--ISFEKDGKKASRG 842
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 140 VTCIYKCGGIDKRTIXKFEKEAQEMGKG 223
+ CIY+ GG+D + FEK+ ++ +G
Sbjct: 623 IECIYRGGGLDPK--ISFEKDGKKASRG 648
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 140 VTCIYKCGGIDKRTIXKFEKEAQEMGKG 223
+ CIY+ GG+D + FEK+ ++ +G
Sbjct: 817 IECIYRGGGLDPK--ISFEKDGKKASRG 842
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,718,032
Number of Sequences: 27780
Number of extensions: 164195
Number of successful extensions: 452
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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