Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_A08
(442 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 87 8e-18
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 73 1e-13
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 73 1e-13
07_01_1001 - 8460467-8460799 55 3e-08
07_03_0321 + 16757414-16757743 53 1e-07
01_06_0098 - 26416768-26416998 31 0.31
12_02_1217 + 27082452-27083593,27085041-27085158 29 1.3
11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877 29 1.7
12_01_0140 - 1088400-1088843 29 2.2
12_01_0090 + 717524-719080 28 3.8
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245... 28 3.8
02_01_0545 + 3996568-3996645,3998061-3998168,3998409-3998493,399... 28 3.8
12_01_0141 - 1091579-1091983 27 5.1
06_01_0362 - 2587112-2587774 27 5.1
05_01_0120 - 828834-831143 27 5.1
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 27 5.1
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 27 6.7
01_06_0683 - 31173763-31174635,31175146-31175436 27 6.7
11_06_0264 - 21785450-21786928 27 8.8
06_03_0854 + 25400855-25403741,25406174-25407708 27 8.8
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 86.6 bits (205), Expect = 8e-18
Identities = 38/64 (59%), Positives = 54/64 (84%)
Frame = +1
Query: 73 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 252
YLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGREK +S+P
Sbjct: 7 YLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVP 66
Query: 253 VGGG 264
GGG
Sbjct: 67 SGGG 70
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 72.5 bits (170), Expect = 1e-13
Identities = 37/86 (43%), Positives = 55/86 (63%)
Frame = +1
Query: 7 LFFRHYTFRVNLGLKKCVTWPRYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVIT 186
LF+ F +L K ++ YLLA L G P+A D+ IL SVG E D K++ +++
Sbjct: 180 LFYPFLIFFCDLLRMKFIS--AYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLS 237
Query: 187 ELNGKDVEQLIAAGREKLSSMPVGGG 264
+L GKD+ ++IA+GREK +S+P GGG
Sbjct: 238 QLAGKDITEIIASGREKFASVPCGGG 263
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 72.5 bits (170), Expect = 1e-13
Identities = 31/64 (48%), Positives = 47/64 (73%)
Frame = +1
Query: 73 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 252
YL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GREK +S+P
Sbjct: 7 YLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFASVP 66
Query: 253 VGGG 264
GGG
Sbjct: 67 SGGG 70
>07_01_1001 - 8460467-8460799
Length = 110
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +1
Query: 73 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 252
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSEMLAFGG 66
Query: 253 VG 258
VG
Sbjct: 67 VG 68
>07_03_0321 + 16757414-16757743
Length = 109
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1
Query: 73 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLS 243
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLA 63
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.31
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 106 PAAADVEKILSSVGIEADGEKLKKVITELNGKD 204
P V KI+ +V IEAD + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 73 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKL 171
Y+LA+ TPA +D E+ VG +ADG+ L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877
Length = 258
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 97 KTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIA 222
KTT E +L+ + DG+K KKV+ L ++VE+L++
Sbjct: 137 KTTTEDDHEEVLLAYRSRKEDGKKRKKVVRRLGKEEVERLLS 178
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 157 DGEKLKKVITELNGKDVEQLIA 222
DG+K+KKV+ L ++VE+L++
Sbjct: 36 DGKKMKKVVKRLGKEEVERLLS 57
>12_01_0140 - 1088400-1088843
Length = 147
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 97 KTTPAAADVEKILSSVGI--EADGEKLKKVITELNGKDVEQLIA 222
KTT D E++L + + DG+K KKV+ L ++VE+L++
Sbjct: 25 KTTTTEDDHEEVLLAYRPREKEDGKKRKKVVRRLGKEEVERLLS 68
>12_01_0090 + 717524-719080
Length = 518
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 260 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIF 126
PP + S P ++ S+S SS + + + S S+PT L F
Sbjct: 60 PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104
>10_08_0104 +
14824122-14824178,14824274-14824318,14824419-14824536,
14825522-14825581,14825783-14825891,14825972-14826197,
14826274-14826390,14826510-14826611
Length = 277
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 82 AVLGGKTTPAAADVEKILSSVGIEADGEKLK 174
A+L GK TP D+E+ L + G GE++K
Sbjct: 14 ALLRGKETPVILDLEESLRAKGDMTQGEEVK 44
>02_01_0545 +
3996568-3996645,3998061-3998168,3998409-3998493,
3998789-3999024,3999250-3999423,3999510-3999557,
3999659-3999718,3999815-3999901,4000007-4000095,
4000209-4000300,4001110-4001171,4001271-4001420,
4001507-4001722
Length = 494
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 58 VTWPRYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKV 180
+TW +LLA K A A+V+ +LS+ I D +LKK+
Sbjct: 283 LTWSVFLLAQNPSKMRKAQAEVDSVLSNETINVD--QLKKL 321
>12_01_0141 - 1091579-1091983
Length = 134
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 151 EADGEKLKKVITELNGKDVEQLIA 222
E DG+K KKV+ L ++VE+L++
Sbjct: 30 EEDGKKRKKVVRRLGKEEVERLLS 53
>06_01_0362 - 2587112-2587774
Length = 220
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 110 AGVVLPPSTASK*RGHVTHFLSPKLTRNV 24
AGV PPS A+K R +T LS L+ N+
Sbjct: 97 AGVAPPPSAAAKRRMSMTMSLSKNLSMNI 125
>05_01_0120 - 828834-831143
Length = 769
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 236 FSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 78
F P+++S +S+ S SPS S PT L + S+ L PS+ S
Sbjct: 503 FLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASSNFSHTLVPSSRS 555
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -3
Query: 173 LSFSPSASIPTELRI--FSTSAAAGVVLPPSTAS 78
LS+SPSAS T+L I + + A V PPS++S
Sbjct: 114 LSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSS 147
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 263 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIP 144
PPP PAA+ S S+P S+V+ ++ PSA +P
Sbjct: 122 PPPEPTPTPAPAPAAVPPSASVP-STVVPPVAAPPSALLP 160
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 27.1 bits (57), Expect = 6.7
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -3
Query: 257 PTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAG------VVL 96
P+G + S P+A + + S S + F P A +P + R + AA G +VL
Sbjct: 133 PSGGFSTASVPSAQAQAASAAASMAVQPGGFLPEAPVPAKARSKRSRAAPGNWSSRLLVL 192
Query: 95 PPSTAS 78
PP AS
Sbjct: 193 PPPPAS 198
>11_06_0264 - 21785450-21786928
Length = 492
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 263 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTE 138
PPP + + S AIS + V FL S +A IPTE
Sbjct: 384 PPPPPLATAASTATAISVAGLGGCGDVALFLGKSSAACIPTE 425
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 263 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPP 90
PPP I + A +S P+S+V + L+ S SA+ F+ + A +PP
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA-----AAFAPAPVAAEAIPP 1172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,273,923
Number of Sequences: 37544
Number of extensions: 147154
Number of successful extensions: 514
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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