Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_A07
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    54   2e-08
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   2.1  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   2.1  
AF047657-8|AAK18944.1|  328|Caenorhabditis elegans Hypothetical ...    26   6.3  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = +2

Query: 173 DIXIEGFNPSAEEA--DEGTDSAVESGVDIXLNHRLXXTYAFGDKKSYTLYLKDYMKKL 343
           +I + G NPSAEE   D+G+D  VE G+DI LNH+L     + D   +  Y+K +MK +
Sbjct: 41  EIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNV 99



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +1

Query: 82  DEMFSDTYKMKLVDEVIYEVTGRLVTRAQG 171
           DE+ SD++ MKLVD+++YE  G+ V R +G
Sbjct: 11  DELSSDSFPMKLVDDLVYEFKGKHVVRKEG 40


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 191  FNPSAEEADEGTDSAVESG-VDIXLNH 268
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 191  FNPSAEEADEGTDSAVESG-VDIXLNH 268
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>AF047657-8|AAK18944.1|  328|Caenorhabditis elegans Hypothetical
           protein F37B4.10 protein.
          Length = 328

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 170 ADIXIEGFNPSAEEADEGTDSAVESGVD 253
           AD  +  F+P   E D G+DS++++G D
Sbjct: 189 ADGPLNRFSPDLVENDAGSDSSLQNGND 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,449,190
Number of Sequences: 27780
Number of extensions: 98920
Number of successful extensions: 242
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)