Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_P12
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067211-3|ABC71845.1|  720|Caenorhabditis elegans Hypothetical ...    29   2.6  
AF067211-2|AAC16990.3|  745|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF025472-2|AAB71074.2|  625|Caenorhabditis elegans Hypothetical ...    28   5.9  
AF025472-1|AAY43980.1|  832|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z82262-1|CAB05151.2|  361|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z71262-9|CAA95817.2|  440|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AY037797-1|AAK94762.1|  412|Caenorhabditis elegans GLY-18 protein.     27   7.8  

>AF067211-3|ABC71845.1|  720|Caenorhabditis elegans Hypothetical
           protein B0205.1b protein.
          Length = 720

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +1

Query: 40  KLIHNIEHVSVSKLFFEDFFQL*STIVFTLQAITFYTSEAAVCPCNNWNRW 192
           K  H++E +  + L F++F +  S I+  +  + FY   A     N WNR+
Sbjct: 245 KTRHSVEPMQATNLIFKEFSERPSRILDKMYQLRFYQKLAP--NMNEWNRY 293


>AF067211-2|AAC16990.3|  745|Caenorhabditis elegans Hypothetical
           protein B0205.1a protein.
          Length = 745

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +1

Query: 40  KLIHNIEHVSVSKLFFEDFFQL*STIVFTLQAITFYTSEAAVCPCNNWNRW 192
           K  H++E +  + L F++F +  S I+  +  + FY   A     N WNR+
Sbjct: 270 KTRHSVEPMQATNLIFKEFSERPSRILDKMYQLRFYQKLAP--NMNEWNRY 318


>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical protein
            C01G10.1 protein.
          Length = 1204

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -3

Query: 297  NIMFLESETKSFILVLNFSEKLTNCSLTFFLACKYPSIPIVAGAYSSLTCVECNCLQGKN 118
            N   +E ++K  +  + +     N  L +  A    +IP + G YS++  VEC  L   N
Sbjct: 1056 NETVIEQDSKYLVEKVKYKGSYYNTVLQWSEAMAKGAIPYLYGVYSAVVMVECKNLLKLN 1115

Query: 117  N 115
            +
Sbjct: 1116 S 1116


>AF025472-2|AAB71074.2|  625|Caenorhabditis elegans Hypothetical
           protein ZK250.5a protein.
          Length = 625

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
 Frame = +1

Query: 22  LIQNQIKLIHNI--EHVSVSKLF 84
           LI+N+IK IHN+  E + +SKLF
Sbjct: 266 LIENEIKFIHNLGSEKMYISKLF 288


>AF025472-1|AAY43980.1|  832|Caenorhabditis elegans Hypothetical
           protein ZK250.5b protein.
          Length = 832

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
 Frame = +1

Query: 22  LIQNQIKLIHNI--EHVSVSKLF 84
           LI+N+IK IHN+  E + +SKLF
Sbjct: 473 LIENEIKFIHNLGSEKMYISKLF 495


>Z82262-1|CAB05151.2|  361|Caenorhabditis elegans Hypothetical
           protein C43F9.4 protein.
          Length = 361

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
 Frame = +2

Query: 83  FLKTSFSCNQRLFLPCRQLHSTQVRLLYAPATIGIDGYLQARKNVKEQFVNFSEKFKTKM 262
           F  T  +C   + L   Q    +    Y P   G+  Y+ A   +   F+N   + +T +
Sbjct: 265 FFVTFSACFPHVILTWMQFQKLKRCHAYVPLIDGLFEYICAAAIIAYNFINAQTRIQTFI 324

Query: 263 NDFVSDSKNM-IFTEDLKNMVHLAEPS 340
           +  V D +N+  ++ D+ + V   E S
Sbjct: 325 SPTVRDVRNVSSYSSDVYSPVCYREKS 351


>Z71262-9|CAA95817.2|  440|Caenorhabditis elegans Hypothetical
           protein F22D6.11 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 481 KTLQCFFRSI*EMKHPHYNWAKHE*TKSELCTLCVEFFNHI 359
           K L   F +I  MK P  +W  HE   S     C+EF +H+
Sbjct: 163 KELSNCFSNIHFMKRPPIDWGSHEIINSAYD--CLEFLSHL 201


>AY037797-1|AAK94762.1|  412|Caenorhabditis elegans GLY-18 protein.
          Length = 412

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 481 KTLQCFFRSI*EMKHPHYNWAKHE*TKSELCTLCVEFFNHI 359
           K L   F +I  MK P  +W  HE   S     C+EF +H+
Sbjct: 135 KELSNCFSNIHFMKRPPIDWGSHEIINSAYD--CLEFLSHL 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,162,486
Number of Sequences: 27780
Number of extensions: 305946
Number of successful extensions: 848
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)