Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_P11
(383 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 58 7e-09
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 58 7e-09
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 58 7e-09
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 58 7e-09
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 58 7e-09
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 58 7e-09
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 58 7e-09
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 58 7e-09
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 58 7e-09
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein. 29 6.8
BC044640-1|AAH44640.1| 579|Homo sapiens phosphatidylinositol gl... 28 8.9
AK022830-1|BAB14263.1| 579|Homo sapiens protein ( Homo sapiens ... 28 8.9
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 58.4 bits (135), Expect = 7e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 50 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 142
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 16 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 46
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 153 MDPKFLRNQRFCKKGNLKPAKQL 221
+DPKFLRN RF KK N K K++
Sbjct: 50 VDPKFLRNMRFAKKHNKKGLKKM 72
>AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.
Length = 1721
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 38 KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 148
+L ++ + +H +R R G +PRK +H S+L
Sbjct: 715 ELARLQRKHDHERDESSRSPARRGPGRPRKRKHSSSL 751
>BC044640-1|AAH44640.1| 579|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class Z protein.
Length = 579
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 163 FGSMHKGGFVPGLPWL 116
FG +H+GG VPGL +L
Sbjct: 427 FGCLHQGGLVPGLEYL 442
>AK022830-1|BAB14263.1| 579|Homo sapiens protein ( Homo sapiens
cDNA FLJ12768 fis, clone NT2RP2001576, weakly similar to
HYPOTHETICAL 62.2 KD PROTEIN C4G8.12C IN CHROMOSOME I.
).
Length = 579
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 163 FGSMHKGGFVPGLPWL 116
FG +H+GG VPGL +L
Sbjct: 427 FGCLHQGGLVPGLEYL 442
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,135,466
Number of Sequences: 237096
Number of extensions: 802947
Number of successful extensions: 2025
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2025
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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