Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_P11
         (383 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.         68   4e-12
AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-P...    68   4e-12
AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-P...    68   4e-12
AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-P...    68   4e-12
AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p pro...    67   6e-12
AE014296-847|AAF47899.1|  604|Drosophila melanogaster CG15020-PA...    27   6.3  
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB...    27   8.4  
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA...    27   8.4  

>U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.
          Length = 76

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFKESKVLQEG 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL    K     +  ++G
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 147 LCMDPKFLRNQRFCKKGNL 203
           L MD KFL NQR+ +KGNL
Sbjct: 33  LGMDVKFLINQRYARKGNL 51


>AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-PC,
           isoform C protein.
          Length = 76

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFKESKVLQEG 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL    K     +  ++G
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 147 LCMDPKFLRNQRFCKKGNL 203
           L MD KFL NQR+ +KGNL
Sbjct: 33  LGMDVKFLINQRYARKGNL 51


>AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-PB,
           isoform B protein.
          Length = 76

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFKESKVLQEG 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL    K     +  ++G
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 147 LCMDPKFLRNQRFCKKGNL 203
           L MD KFL NQR+ +KGNL
Sbjct: 33  LGMDVKFLINQRYARKGNL 51


>AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-PA,
           isoform A protein.
          Length = 76

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFKESKVLQEG 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL    K     +  ++G
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 147 LCMDPKFLRNQRFCKKGNL 203
           L MD KFL NQR+ +KGNL
Sbjct: 33  LGMDVKFLINQRYARKGNL 51


>AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p
           protein.
          Length = 56

 Score = 67.3 bits (157), Expect = 6e-12
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 148
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33


>AE014296-847|AAF47899.1|  604|Drosophila melanogaster CG15020-PA
           protein.
          Length = 604

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 107 HFCELCGFGYDLYDSLTLPF 48
           HF   C +GYD + ++T PF
Sbjct: 313 HFKVTCEYGYDFWKTVTFPF 332


>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
           isoform B protein.
          Length = 3313

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 59  SKNHTNHNQNRKAHRNG 109
           SKN+ NHNQN+    NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560


>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
           isoform A protein.
          Length = 3313

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 59  SKNHTNHNQNRKAHRNG 109
           SKN+ NHNQN+    NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,904,602
Number of Sequences: 53049
Number of extensions: 224790
Number of successful extensions: 1119
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)