Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_P07
         (571 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical pr...   120   6e-28

>Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical
           protein F26H9.5 protein.
          Length = 370

 Score =  120 bits (290), Expect = 6e-28
 Identities = 59/151 (39%), Positives = 79/151 (52%)
 Frame = +2

Query: 110 NFGAGPAKLPEEVYXXXXXXXXXXXXXGISLLETSHRSSTYMKLNVEIQDVVRNLLDVPD 289
           NF AGPAKLPEEV              G+S++E SHRS  +  L  E   ++R L++VPD
Sbjct: 9   NFAAGPAKLPEEVLLKMQEEQLNFNNLGVSVIEMSHRSKEFGALLNETISLIRELMNVPD 68

Query: 290 NYKVXXXXXXXXXXXXXVPLNLISRTGTADYVVTGAWSXXXXXXXXXYGKVNXVLPPTDK 469
           N+++             +PLNL      ADY+VTGAWS         Y  V  V  P+  
Sbjct: 69  NFEILFMQGGGTGQFAAIPLNLKGDHEHADYIVTGAWSSKAADEAGKYINVKKVFQPSKP 128

Query: 470 YEDIPDQTKWNLDPHASYVHICTNETIHGVE 562
           Y  +PDQ  W  D  A+Y++ C NET+HG+E
Sbjct: 129 YVTVPDQENWVHDEKAAYLYYCANETVHGIE 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,931,421
Number of Sequences: 27780
Number of extensions: 181418
Number of successful extensions: 455
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)