Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_P06
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.18 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.54 
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.7  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 548 RCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 643
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 347 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 442
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 316 PDPQIPHRTRNRH 354
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 452 LNPKGQQREDDPDHVRNIQPRPPCTSPSKPCSRCTRP 562
           +N   +  E  P+ V   +P+P  T+ S+P     +P
Sbjct: 382 INAALKSDEIPPEPVPTPEPQPTQTTESEPTQASEQP 418


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -3

Query: 615 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 517
           HG    V G+         ++  +H LD D  G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +2

Query: 227 WEGPAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 346
           W G   +   VG+    S++  +   K+ +    YP E+G
Sbjct: 37  WPGRPPKRAPVGLSLAASHLQQQQLKKQRLDNGDYPYENG 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,556
Number of Sequences: 336
Number of extensions: 3603
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)