Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_O20
         (413 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0068 - 13021090-13021197,13021319-13021354,13022245-130223...    31   0.36 
12_02_0585 + 20824752-20825954,20826141-20826329,20826533-208266...    29   1.5  
12_02_0189 + 15165485-15168694                                         28   2.6  
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501...    28   2.6  
03_02_0726 + 10722759-10722857,10722969-10723058,10723141-107232...    27   5.9  

>07_03_0068 -
           13021090-13021197,13021319-13021354,13022245-13022322,
           13022412-13022514,13022732-13022817,13023036-13023090,
           13023186-13023250,13023997-13024086,13024415-13024530,
           13024701-13024710
          Length = 248

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 307 SHIFACFNHAKMGNWQPLAAVTFVSGTRTVIRKSKVQL 194
           +H+  C   +  GNW+ +  + F+ G + V  K K+Q+
Sbjct: 139 AHLQLCIESSSNGNWRSIWTLEFIDGLQLVEIKGKIQV 176


>12_02_0585 +
           20824752-20825954,20826141-20826329,20826533-20826690,
           20826913-20827009,20827368-20827730,20829225-20829303,
           20830180-20830286
          Length = 731

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 218 NCSCTANKGHGGQWLPISHLRVIE 289
           +C C  +KG   + +P+ HLR+++
Sbjct: 557 DCKCEQHKGWSNEMIPLDHLRMVD 580


>12_02_0189 + 15165485-15168694
          Length = 1069

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 333 SVSSDGLRRRQGWDPD 380
           +V S GLRRR  WDPD
Sbjct: 767 TVDSVGLRRRTAWDPD 782


>08_02_0758 +
           20848078-20849579,20849660-20849850,20849944-20850179,
           20850254-20850973
          Length = 882

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 328 PKASPPMDCDAGKDGIPMRRALPLKW 405
           P    P+    GKDG P+ R  PL W
Sbjct: 452 PPPPLPLQIQVGKDGSPLPRLKPLHW 477


>03_02_0726 + 10722759-10722857,10722969-10723058,10723141-10723245,
            10723597-10723698,10724721-10724805,10725281-10725365,
            10725473-10725517,10725685-10728672,10728839-10729055,
            10729193-10729765
          Length = 1462

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 112  KNFIH*NELSSVTIAEGAISYSCKNFTDYRCR 17
            +N  H  +LSS   A+G  S SCKN +  R R
Sbjct: 954  QNIDHPKKLSSSASADGCGSLSCKNASPARVR 985


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,308,485
Number of Sequences: 37544
Number of extensions: 220399
Number of successful extensions: 645
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)