Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_O20
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51925-1|AAA97909.1| 396|Caenorhabditis elegans trehalase I pro... 31 0.25
AJ512337-1|CAD54510.1| 567|Caenorhabditis elegans trehalase pro... 31 0.25
AF039713-5|AAB96724.2| 567|Caenorhabditis elegans Trehalase pro... 31 0.25
Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical pr... 29 1.3
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 27 4.1
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 27 7.1
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr... 26 9.4
U23139-3|AAK31486.2| 275|Caenorhabditis elegans Hypothetical pr... 26 9.4
>U51925-1|AAA97909.1| 396|Caenorhabditis elegans trehalase I
protein.
Length = 396
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 327 IQYQIPLPTSSLVSITRRWEIGNHWPP 247
++Y LPTS +S T++W+ N WPP
Sbjct: 256 LKYTKGLPTSLAMSSTQQWDKENAWPP 282
>AJ512337-1|CAD54510.1| 567|Caenorhabditis elegans trehalase
protein.
Length = 567
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 327 IQYQIPLPTSSLVSITRRWEIGNHWPP 247
++Y LPTS +S T++W+ N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453
>AF039713-5|AAB96724.2| 567|Caenorhabditis elegans Trehalase
protein 1 protein.
Length = 567
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 327 IQYQIPLPTSSLVSITRRWEIGNHWPP 247
++Y LPTS +S T++W+ N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453
>Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical
protein F46F3.2 protein.
Length = 618
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 339 RRFGIQYQIPLPTSSLVSITRRWEIGNHWPP 247
+ G+ YQ PLP+S+++ R+ E PP
Sbjct: 235 QNLGLDYQRPLPSSTILPFLRKMEYDARQPP 265
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 325 DPKASPPMDCDAGKDGIPM 381
D ASPPMDC A D +P+
Sbjct: 460 DSPASPPMDCPASPDMVPV 478
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 396 RQGSPHRDPILACVAIHRRRRFGIQYQIPLPTSSLVSITRRWEIGNHWPP*PLLAVHEQ 220
RQG P + P+L A+ RR + + PL +S +V T R+ + L + HE+
Sbjct: 533 RQGIPGQPPMLTVKALD-SRRMQLTWDKPLYSSPVVGYTVRYNTSDGEKELTLTSPHEK 590
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 396 RQGSPHRDPILACVAIHRRRRFGIQYQIPLPTSSLVSITRRWEIGNHWPP*PLLAVHEQ 220
RQG P + P+L A+ RR + + PL +S +V T R+ + L + HE+
Sbjct: 533 RQGIPGQPPMLTVKALD-SRRMQLTWDKPLYSSPVVGYTVRYNTSDGEKELTLTSPHEK 590
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 396 RQGSPHRDPILACVAIHRRRRFGIQYQIPLPTSSLVSITRRWEIGNHWPP*PLLAVHEQ 220
RQG P + P+L A+ RR + + PL +S +V T R+ + L + HE+
Sbjct: 533 RQGIPGQPPMLTVKALD-SRRMQLTWDKPLYSSPVVGYTVRYNTSDGEKELTLTSPHEK 590
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 325 DPKASPPMDCDAGKDGIPMRRALP 396
DP + P DC AG+ G P R P
Sbjct: 141 DPTLASPCDCPAGEPGEPGPRGSP 164
>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical protein
ZK930.1 protein.
Length = 1354
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 388 LSASGSHPCLRRNPSEETLWDPISDSTSHIFACFNHAKMGNWQPLAA 248
L+AS SHP L +PS +L +++ I H G L A
Sbjct: 930 LAASASHPVLSASPSAGSLGSSSNNNVKGIIITHLHEHSGKITKLCA 976
>U23139-3|AAK31486.2| 275|Caenorhabditis elegans Hypothetical
protein F13H8.4 protein.
Length = 275
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 170 IGCKFFVT*LNF*FSNNCSCTANKGHGGQWLPISHLRVIETSE 298
+GC + + F + S A+ G+ +++ + HLR++E E
Sbjct: 165 VGCVLIILGVLLFFGIHASNYAHIGNANRYVELGHLRIVEHRE 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,639,701
Number of Sequences: 27780
Number of extensions: 187451
Number of successful extensions: 488
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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