Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_O20
         (413 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.2  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   7.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.3  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    20   9.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 113 KLVVCRSDF*RTKTTQSEVIGCK 181
           +L V  SD+   +  Q+E IGCK
Sbjct: 600 ELFVMVSDYKDDRVEQNEPIGCK 622


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 321 IGSQSVSSDGLRRR 362
           +G Q+ + DGLRRR
Sbjct: 425 VGEQARAQDGLRRR 438


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 327 IQYQIPLPTSSLVSITRRWEI 265
           I + IP     LVSI   WE+
Sbjct: 109 ITFDIPCEHRGLVSIIDGWEL 129


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +3

Query: 129 EVIFNEQKQHNQKSLGVNFL*RN*TFDFRITVRVPLTK 242
           ++    +K+ N +   V+ +  N T+D   T+R+P+ +
Sbjct: 152 KITMKSKKEQNAEEDIVDPVEENETYDEFDTIRIPIVR 189


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 371 PSLPASQSIGGDALGSNIR 315
           P+L  S ++ GDAL +N++
Sbjct: 600 PTLTHSPTMYGDALNANLQ 618


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 32  SKVFTAVGNRTLCNSN 79
           SK+ +++ N+T+ N+N
Sbjct: 312 SKIISSLSNKTIHNNN 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,272
Number of Sequences: 438
Number of extensions: 2452
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)